Strain Fitness in Escherichia coli BW25113 around b1609

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,679,924	-	ydgC	b1607	0.61	-0.1
1,680,147	+				+0.2
1,680,268	+	rstA	b1608	0.12	-0.5
1,680,438	+	rstA	b1608	0.35	+0.8
1,680,439	+	rstA	b1608	0.36	-0.2
1,680,439	+	rstA	b1608	0.36	+0.7
1,680,544	+	rstA	b1608	0.50	+0.2
1,680,552	-	rstA	b1608	0.51	+1.1
1,680,552	-	rstA	b1608	0.51	+0.1
1,680,575	+	rstA	b1608	0.54	+0.4
1,680,981	+				+0.4
1,680,981	+				+0.1
1,681,080	+	rstB	b1609	0.13	+0.2
1,681,099	-	rstB	b1609	0.15	-0.3
1,681,176	+	rstB	b1609	0.21	+1.0
1,681,555	+	rstB	b1609	0.50	-0.0
1,681,555	+	rstB	b1609	0.50	+1.1
1,681,779	-	rstB	b1609	0.67	+0.1
1,681,779	-	rstB	b1609	0.67	+0.5
1,681,827	+	rstB	b1609	0.71	+1.3
1,682,011	+	rstB	b1609	0.85	-0.2
1,682,068	+	rstB	b1609	0.89	+0.5
1,682,068	+	rstB	b1609	0.89	-0.1
1,682,090	+				+0.3
1,682,098	-				-0.7
1,682,100	-				-0.9
1,682,102	+				+0.5
1,682,102	+				+0.2
1,682,223	+				+0.1
1,682,223	+				+1.0
1,682,306	-				+0.1
1,682,451	-	tus	b1610	0.18	+0.2
1,682,567	-	tus	b1610	0.31	-0.7
1,682,620	+	tus	b1610	0.36	-0.1
1,682,620	+	tus	b1610	0.36	-0.2
1,682,820	+	tus	b1610	0.58	+0.5
1,682,838	+	tus	b1610	0.60	-0.3
1,682,878	+	tus	b1610	0.64	-0.1
1,682,886	-	tus	b1610	0.65	-1.3
1,682,941	-	tus	b1610	0.71	+1.2
1,682,941	-	tus	b1610	0.71	-1.4
1,683,046	+	tus	b1610	0.82	+0.2
1,683,046	+	tus	b1610	0.82	-0.1
1,683,207	+				-0.6