Strain Fitness in Escherichia coli BW25113 around b1450

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,517,310	+	yncB	b1449	0.25	-0.0
1,517,341	+	yncB	b1449	0.28	-0.2
1,517,341	+	yncB	b1449	0.28	-0.2
1,517,496	-	yncB	b1449	0.43	+0.2
1,517,517	-	yncB	b1449	0.45	-0.0
1,517,635	-	yncB	b1449	0.56	-0.4
1,517,635	-	yncB	b1449	0.56	-0.2
1,517,739	-	yncB	b1449	0.66	-0.2
1,517,739	-	yncB	b1449	0.66	+0.0
1,517,741	-	yncB	b1449	0.66	+0.5
1,517,805	+	yncB	b1449	0.73	-0.8
1,517,805	+	yncB	b1449	0.73	+0.1
1,517,839	-	yncB	b1449	0.76	+0.5
1,517,839	-	yncB	b1449	0.76	+0.1
1,517,923	+	yncB	b1449	0.84	+0.1
1,517,923	+	yncB	b1449	0.84	-0.0
1,517,950	-	yncB	b1449	0.87	+0.4
1,517,950	-	yncB	b1449	0.87	-0.4
1,518,047	-				+1.1
1,518,065	-				+2.1
1,518,067	-				+2.1
1,518,147	+				-0.3
1,518,175	-				+1.3
1,518,175	-				+0.7
1,518,200	+				+0.1
1,518,225	-				+1.9
1,518,237	+				-0.7
1,518,254	+				-0.3
1,518,295	-				+0.4
1,518,330	+				+0.3
1,518,338	-				+0.4
1,518,349	-				+2.1
1,518,354	+	b1450	b1450	0.10	+1.1
1,518,423	+	b1450	b1450	0.21	+0.6
1,518,425	+	b1450	b1450	0.21	+1.1
1,518,425	+	b1450	b1450	0.21	+0.5
1,518,425	+	b1450	b1450	0.21	+1.1
1,518,425	+	b1450	b1450	0.21	+1.6
1,518,495	+	b1450	b1450	0.31	+1.3
1,518,498	+	b1450	b1450	0.32	+0.3
1,518,506	+	b1450	b1450	0.33	-0.6
1,518,746	-	b1450	b1450	0.69	+2.1
1,518,756	+	b1450	b1450	0.71	-0.0
1,518,756	+	b1450	b1450	0.71	+0.5
1,518,767	+	b1450	b1450	0.72	+0.3
1,518,775	-	b1450	b1450	0.73	+1.1
1,518,779	+	b1450	b1450	0.74	+0.2
1,518,844	+	b1450	b1450	0.84	+1.9
1,518,844	+	b1450	b1450	0.84	+3.3
1,518,871	+	b1450	b1450	0.88	+0.6
1,518,872	+	b1450	b1450	0.88	+0.7
1,518,954	-				+0.2
1,518,974	+				-0.7
1,519,053	-				+0.5
1,519,084	-				-0.1
1,519,089	-				+0.1
1,519,228	-	yncD	b1451	0.11	+0.1
1,519,274	-	yncD	b1451	0.14	+0.1
1,519,282	-	yncD	b1451	0.14	+0.0
1,519,282	-	yncD	b1451	0.14	+0.5
1,519,284	-	yncD	b1451	0.14	-0.5
1,519,296	+	yncD	b1451	0.15	+2.1
1,519,313	+	yncD	b1451	0.16	+0.3
1,519,313	+	yncD	b1451	0.16	+0.8
1,519,426	+	yncD	b1451	0.21	+0.4
1,519,485	-	yncD	b1451	0.24	+0.1
1,519,551	-	yncD	b1451	0.27	+0.4
1,519,645	+	yncD	b1451	0.31	+0.0
1,519,653	-	yncD	b1451	0.32	-0.8
1,519,653	-	yncD	b1451	0.32	-1.3
1,519,784	-	yncD	b1451	0.38	+0.1
1,519,828	+	yncD	b1451	0.40	+0.3