Strain Fitness in Escherichia coli BW25113 around b1412

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,479,431	-	ynbD	b1411	0.39	+0.5
1,479,489	+	ynbD	b1411	0.43	-0.1
1,479,501	+	ynbD	b1411	0.44	+0.3
1,479,504	+	ynbD	b1411	0.44	+0.1
1,479,574	-	ynbD	b1411	0.50	-0.2
1,479,579	-	ynbD	b1411	0.50	-0.2
1,479,579	-	ynbD	b1411	0.50	+0.2
1,479,586	-	ynbD	b1411	0.51	+0.0
1,479,670	-	ynbD	b1411	0.57	+0.7
1,479,673	+	ynbD	b1411	0.57	+0.3
1,479,970	-	ynbD	b1411	0.80	+0.0
1,480,154	-				+1.3
1,480,167	+				+0.2
1,480,271	+				+1.1
1,480,271	+				+0.7
1,480,667	-	azoR	b1412	0.64	+0.1
1,480,729	+	azoR	b1412	0.74	+0.5
1,480,729	+	azoR	b1412	0.74	+0.4
1,481,461	+				-0.5
1,481,461	+				+0.0
1,481,608	+	hrpA	b1413	0.13	-0.0
1,481,635	-	hrpA	b1413	0.14	-0.2
1,481,646	+	hrpA	b1413	0.14	-0.0
1,481,646	+	hrpA	b1413	0.14	+0.3
1,481,804	+	hrpA	b1413	0.18	+0.2
1,481,804	+	hrpA	b1413	0.18	-0.2