Strain Fitness in Escherichia coli BW25113 around b1193

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,241,424	+				-5.1
1,241,425	-				-3.5
1,241,433	+				-5.1
1,241,501	+	ldcA	b1192	0.12	-6.3
1,241,572	-	ldcA	b1192	0.20	-4.4
1,241,581	+	ldcA	b1192	0.21	-3.4
1,241,747	+	ldcA	b1192	0.39	-0.9
1,241,936	-	ldcA	b1192	0.60	-4.6
1,241,936	-	ldcA	b1192	0.60	-5.5
1,241,961	-	ldcA	b1192	0.63	-4.2
1,241,961	-	ldcA	b1192	0.63	-4.2
1,241,999	-	ldcA	b1192	0.67	-3.4
1,242,033	+	ldcA	b1192	0.70	-4.5
1,242,208	-	ldcA	b1192	0.90	-2.8
1,242,237	-				-3.9
1,242,284	+				-2.7
1,242,305	-				-4.4
1,242,337	+				+0.3
1,242,355	-				-0.4
1,242,365	-				+0.0
1,242,365	-				-0.2
1,242,465	+	mltE	b1193	0.10	-0.0
1,242,655	+	mltE	b1193	0.41	+0.3
1,243,159	+	ycgR	b1194	0.19	+0.3
1,243,291	-	ycgR	b1194	0.37	-0.0
1,243,291	-	ycgR	b1194	0.37	+0.1
1,243,521	+	ycgR	b1194	0.69	-0.3
1,243,589	+	ycgR	b1194	0.78	+0.0
1,243,637	-	ycgR	b1194	0.84	-0.0
1,243,688	+				+0.2
1,243,722	-				+0.6
1,243,732	+				+0.9
1,243,798	+				-0.5
1,243,864	+				-0.7
1,243,875	+				+0.0
1,243,890	+				-0.4
1,243,893	-				-0.9
1,243,899	+				+0.1
1,243,904	+				-0.3