Strain Fitness in Escherichia coli BW25113 around b0870

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
906,527	+	ybjT	b0869	0.32	-0.3
906,527	+	ybjT	b0869	0.32	-0.3
906,635	-	ybjT	b0869	0.39	+0.1
906,667	-	ybjT	b0869	0.41	+0.1
906,667	-	ybjT	b0869	0.41	-0.2
906,865	-	ybjT	b0869	0.55	-0.4
907,084	+	ybjT	b0869	0.71	-0.0
907,090	+	ybjT	b0869	0.71	+0.0
907,090	+	ybjT	b0869	0.71	-2.3
907,271	+	ybjT	b0869	0.84	-0.0
907,385	+				-1.2
907,462	+				+0.6
907,473	-				-0.3
908,109	+	ltaE	b0870	0.59	-0.3
908,179	-	ltaE	b0870	0.66	+0.6
908,192	-	ltaE	b0870	0.67	+0.2
908,220	+	ltaE	b0870	0.70	-0.2
908,235	+	ltaE	b0870	0.72	-0.5
908,314	+	ltaE	b0870	0.80	+0.2
908,337	+	ltaE	b0870	0.82	+0.5
908,403	-	ltaE	b0870	0.89	+1.9
908,461	-				+0.2
908,493	+				-0.4
908,493	+				+0.1
908,513	+				+0.2
908,626	+				+0.0
908,626	+				+0.1
908,794	+	poxB	b0871	0.14	-0.2
908,819	+	poxB	b0871	0.15	+0.2
908,939	+	poxB	b0871	0.22	-0.2
909,025	-	poxB	b0871	0.27	+0.0
909,025	-	poxB	b0871	0.27	-0.2
909,079	-				+0.3
909,134	+	poxB	b0871	0.34	-0.4
909,142	+	poxB	b0871	0.34	+0.2
909,183	+	poxB	b0871	0.37	+0.4
909,183	+	poxB	b0871	0.37	-0.1
909,465	-	poxB	b0871	0.53	-0.8
909,465	-	poxB	b0871	0.53	+0.6