Strain Fitness in Escherichia coli BW25113 around b2625

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
2,756,090	-	yfjH	b2623	0.44	+2.7
2,756,123	-	yfjH	b2623	0.48	+2.3
2,756,158	-	yfjH	b2623	0.51	+2.7
2,756,158	-	yfjH	b2623	0.51	+1.1
2,756,165	-	yfjH	b2623	0.52	+0.3
2,756,259	-	yfjH	b2623	0.62	+0.6
2,756,306	-	yfjH	b2623	0.67	-1.7
2,756,306	-	yfjH	b2623	0.67	+0.0
2,756,308	-	yfjH	b2623	0.67	+1.7
2,756,308	-	yfjH	b2623	0.67	+1.5
2,756,317	-	yfjH	b2623	0.68	+2.4
2,756,317	-	yfjH	b2623	0.68	-1.7
2,756,317	-	yfjH	b2623	0.68	+0.3
2,756,317	-	yfjH	b2623	0.68	+0.9
2,756,318	-	yfjH	b2623	0.68	+0.5
2,756,320	-	yfjH	b2623	0.68	+1.5
2,756,325	-	yfjH	b2623	0.69	+0.7
2,756,325	-	yfjH	b2623	0.69	+1.3
2,756,334	-	yfjH	b2623	0.70	+2.1
2,756,335	-	yfjH	b2623	0.70	-1.6
2,756,389	-	yfjH	b2623	0.76	+0.4
2,756,389	-	yfjH	b2623	0.76	+0.6
2,756,389	-	yfjH	b2623	0.76	-0.1
2,756,412	-	yfjH	b2623	0.78	+0.5
2,756,412	-	yfjH	b2623	0.78	+0.4
2,756,412	-	yfjH	b2623	0.78	-1.7
2,756,412	-	yfjH	b2623	0.78	+1.4
2,756,412	-	yfjH	b2623	0.78	-0.2
2,756,412	-	yfjH	b2623	0.78	+0.4
2,756,445	-	yfjH	b2623	0.81	+0.0
2,756,445	-	yfjH	b2623	0.81	+0.2
2,756,457	-	yfjH	b2623	0.83	+0.5
2,756,493	-	yfjH	b2623	0.86	+1.2
2,756,499	-	yfjH	b2623	0.87	-0.3
2,756,569	-				-0.7
2,756,611	+				+0.8
2,756,698	-	alpA	b2624	0.15	-1.3
2,756,698	-	alpA	b2624	0.15	-1.1
2,756,703	-	alpA	b2624	0.17	-0.5
2,756,737	-	alpA	b2624	0.33	+0.7
2,756,737	-	alpA	b2624	0.33	+0.1
2,756,739	+	alpA	b2624	0.34	+0.8
2,756,741	+	alpA	b2624	0.35	+0.0
2,756,741	+	alpA	b2624	0.35	-0.1
2,756,741	+	alpA	b2624	0.35	+0.3
2,756,741	+	alpA	b2624	0.35	+0.2
2,756,741	+	alpA	b2624	0.35	+0.3
2,756,741	+	alpA	b2624	0.35	+2.1
2,756,741	+	alpA	b2624	0.35	-0.2
2,756,741	+	alpA	b2624	0.35	+1.6
2,756,741	+	alpA	b2624	0.35	-0.2
2,756,741	+	alpA	b2624	0.35	-0.5
2,756,741	+	alpA	b2624	0.35	+1.0
2,756,741	+	alpA	b2624	0.35	+0.5
2,756,746	-	alpA	b2624	0.38	+0.9
2,756,749	-	alpA	b2624	0.39	-1.9
2,756,751	-	alpA	b2624	0.40	+0.9
2,756,758	+	alpA	b2624	0.43	-1.1
2,756,758	+	alpA	b2624	0.43	-0.0
2,756,768	+	alpA	b2624	0.48	-0.6
2,756,768	+	alpA	b2624	0.48	+0.3
2,756,808	+	alpA	b2624	0.67	-0.5
2,756,827	+	alpA	b2624	0.76	+0.7
2,756,827	+	alpA	b2624	0.76	+0.6
2,756,827	+	alpA	b2624	0.76	-0.9
2,756,838	+	alpA	b2624	0.81	-0.3
2,756,838	+	alpA	b2624	0.81	-0.0
2,756,838	+	alpA	b2624	0.81	-0.4
2,756,838	+	alpA	b2624	0.81	-0.4
2,756,838	+	alpA	b2624	0.81	+0.4
2,756,848	+	alpA	b2624	0.85	-0.8
2,756,848	+	alpA	b2624	0.85	+0.3
2,756,850	+	alpA	b2624	0.86	-0.2
2,756,850	+	alpA	b2624	0.86	-0.4
2,756,850	+	alpA	b2624	0.86	-0.1
2,756,862	+				-0.0
2,756,893	+				+0.3
2,756,906	+				-1.2
2,756,909	+				-1.6
2,756,916	+				+1.7
2,756,918	+				-1.3
2,756,918	+				+2.7
2,756,918	+				-0.9
2,756,920	+				-0.9
2,757,018	-				+0.3
2,757,084	-				-0.8
2,757,088	-				+1.7
2,757,089	-				+0.2
2,757,089	-				+0.5
2,757,092	-				+1.5
2,757,093	-				+2.7
2,757,093	-				+2.7
2,757,107	-				+0.7
2,757,184	-	yfjI	b2625	0.13	+2.7
2,757,521	-	yfjI	b2625	0.36	+2.7
2,757,523	-	yfjI	b2625	0.37	+1.1
2,757,575	+	yfjI	b2625	0.40	+2.7
2,757,776	+	yfjI	b2625	0.55	+2.7
2,757,780	+	yfjI	b2625	0.55	+1.2
2,757,791	+	yfjI	b2625	0.56	+0.8
2,757,791	+	yfjI	b2625	0.56	+2.7
2,757,791	+	yfjI	b2625	0.56	+2.7
2,757,838	+	yfjI	b2625	0.59	+2.7
2,757,838	+	yfjI	b2625	0.59	+2.7
2,758,060	+	yfjI	b2625	0.75	+2.7
2,758,060	+	yfjI	b2625	0.75	+2.7
2,758,565	+				+2.7
2,758,599	+				+1.7
2,758,650	-	yfjJ	b2626	0.13	+2.7
2,758,742	+	yfjJ	b2626	0.28	+2.7
2,758,744	-	yfjJ	b2626	0.28	+2.7
2,758,744	-	yfjJ	b2626	0.28	+2.7
2,758,760	+	yfjJ	b2626	0.30	+1.7
2,758,784	+	yfjJ	b2626	0.34	+2.7
2,758,820	+	yfjJ	b2626	0.40	+1.7
2,758,828	+	yfjJ	b2626	0.41	-0.1
2,758,900	-	yfjJ	b2626	0.53	+0.1
2,758,934	-	yfjJ	b2626	0.58	-0.7
2,758,973	-	yfjJ	b2626	0.64	+2.0
2,758,987	-	yfjJ	b2626	0.67	+0.1
2,758,989	+	yfjJ	b2626	0.67	+0.9
2,758,989	+	yfjJ	b2626	0.67	+0.6
2,758,989	+	yfjJ	b2626	0.67	+0.4
2,758,989	+	yfjJ	b2626	0.67	-0.6
2,758,989	+	yfjJ	b2626	0.67	-0.1
2,758,989	+	yfjJ	b2626	0.67	-2.6
2,758,989	+	yfjJ	b2626	0.67	+0.6
2,758,989	+	yfjJ	b2626	0.67	-0.0
2,758,989	+	yfjJ	b2626	0.67	-0.2
2,758,994	+	yfjJ	b2626	0.68	+1.7
2,758,996	+	yfjJ	b2626	0.68	-2.6
2,758,996	+	yfjJ	b2626	0.68	+0.1
2,758,997	-	yfjJ	b2626	0.68	+0.2
2,758,997	-	yfjJ	b2626	0.68	+1.3
2,758,997	-	yfjJ	b2626	0.68	+0.1
2,758,997	-	yfjJ	b2626	0.68	-0.8
2,758,997	-	yfjJ	b2626	0.68	+0.5
2,758,997	-	yfjJ	b2626	0.68	-1.1
2,758,997	-	yfjJ	b2626	0.68	+1.7
2,758,997	-	yfjJ	b2626	0.68	-0.2
2,758,997	-	yfjJ	b2626	0.68	-1.1
2,758,997	-	yfjJ	b2626	0.68	-1.7
2,758,999	+	yfjJ	b2626	0.69	+0.1
2,758,999	-	yfjJ	b2626	0.69	-0.1
2,759,002	-	yfjJ	b2626	0.69	+2.7
2,759,005	-	yfjJ	b2626	0.70	-0.6
2,759,007	-	yfjJ	b2626	0.70	+1.4
2,759,007	-	yfjJ	b2626	0.70	+1.7
2,759,007	-	yfjJ	b2626	0.70	+2.2
2,759,010	-	yfjJ	b2626	0.70	+0.5
2,759,010	-	yfjJ	b2626	0.70	+0.5
2,759,011	+	yfjJ	b2626	0.70	-0.4
2,759,013	+	yfjJ	b2626	0.71	+0.1
2,759,013	+	yfjJ	b2626	0.71	+0.9
2,759,013	+	yfjJ	b2626	0.71	+0.1
2,759,013	+	yfjJ	b2626	0.71	+1.3
2,759,013	+	yfjJ	b2626	0.71	+0.6
2,759,019	-	yfjJ	b2626	0.72	+0.3
2,759,019	-	yfjJ	b2626	0.72	-1.9
2,759,021	-	yfjJ	b2626	0.72	-0.9
2,759,021	-	yfjJ	b2626	0.72	+0.1
2,759,021	-	yfjJ	b2626	0.72	+1.4
2,759,021	-	yfjJ	b2626	0.72	+0.3
2,759,021	-	yfjJ	b2626	0.72	+0.3
2,759,021	-	yfjJ	b2626	0.72	-0.9
2,759,021	-	yfjJ	b2626	0.72	-0.7
2,759,079	-	yfjJ	b2626	0.81	-0.1
2,759,081	+	yfjJ	b2626	0.82	-0.3
2,759,081	+	yfjJ	b2626	0.82	-0.6
2,759,094	-	yfjJ	b2626	0.84	-0.5
2,759,096	+	yfjJ	b2626	0.84	-0.3
2,759,096	+	yfjJ	b2626	0.84	+0.2
2,759,096	+	yfjJ	b2626	0.84	-0.1
2,759,096	+	yfjJ	b2626	0.84	+0.1
2,759,096	+	yfjJ	b2626	0.84	+0.1
2,759,096	+	yfjJ	b2626	0.84	+0.5
2,759,114	+	yfjJ	b2626	0.87	+1.4
2,759,138	+				-0.9
2,759,138	+				+0.0
2,759,149	+				+0.2
2,759,176	-				-0.1
2,759,176	-				-0.5
2,759,228	-				-0.4
2,759,238	-				-1.1
2,759,243	-				-0.0
2,759,286	-				+0.2
2,759,286	-				-0.5
2,759,296	-				+0.1
2,759,296	-				+0.3
2,759,296	-				+0.1
2,759,296	-				-0.3
2,759,296	-				+0.7
2,759,299	-				+0.1
2,759,299	-				+0.4
2,759,299	-				+0.0
2,759,324	-				-1.0
2,759,324	-				-0.3
2,759,389	-				+0.3
2,759,408	-				+0.3
2,759,411	+				+0.7