Strain Fitness in Escherichia coli BW25113 around b2537

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
2,665,029	+	hcaT	b2536	0.26	-0.2
2,665,232	+	hcaT	b2536	0.44	+1.0
2,665,232	+	hcaT	b2536	0.44	-0.0
2,665,242	+	hcaT	b2536	0.45	-0.3
2,665,242	+	hcaT	b2536	0.45	+0.0
2,665,318	-	hcaT	b2536	0.52	-0.4
2,665,358	+	hcaT	b2536	0.55	-0.5
2,665,358	+	hcaT	b2536	0.55	+0.1
2,665,375	+	hcaT	b2536	0.57	-0.1
2,665,375	+	hcaT	b2536	0.57	-0.3
2,665,383	-	hcaT	b2536	0.57	-0.6
2,665,518	-	hcaT	b2536	0.69	-0.0
2,665,518	-	hcaT	b2536	0.69	-0.1
2,665,530	-	hcaT	b2536	0.70	-0.3
2,665,530	-	hcaT	b2536	0.70	-0.6
2,665,556	+	hcaT	b2536	0.73	-0.1
2,665,556	+	hcaT	b2536	0.73	+0.4
2,665,794	-				-0.3
2,665,794	-				+0.2
2,665,833	+				+0.3
2,665,833	+				-0.6
2,665,896	-				+1.1
2,665,896	-				+0.2
2,665,896	-				+0.0
2,665,896	-				+0.5
2,665,960	+				-0.2
2,666,111	-				-0.4
2,666,203	-	hcaR	b2537	0.20	-0.2
2,666,213	+	hcaR	b2537	0.21	+0.2
2,666,213	+	hcaR	b2537	0.21	-0.2
2,666,216	-	hcaR	b2537	0.21	+0.4
2,666,269	-	hcaR	b2537	0.27	+0.0
2,666,334	-	hcaR	b2537	0.34	+0.1
2,666,359	+	hcaR	b2537	0.37	+0.3
2,666,361	+	hcaR	b2537	0.37	+0.5
2,666,389	-	hcaR	b2537	0.41	+0.5
2,666,389	-	hcaR	b2537	0.41	+0.0
2,666,551	+	hcaR	b2537	0.59	+1.5
2,666,563	+	hcaR	b2537	0.60	-0.3
2,666,824	+	hcaR	b2537	0.89	+0.3
2,666,839	-				-0.1
2,666,877	+				-0.1
2,666,877	+				+0.1
2,666,931	-				-0.4
2,667,028	-				-0.2
2,667,028	-				+0.0
2,667,079	+				-0.7
2,667,079	+				-0.4
2,667,364	-	hcaE	b2538	0.23	+0.2
2,667,364	-	hcaE	b2538	0.23	+0.0
2,667,536	+	hcaE	b2538	0.35	+0.1
2,667,646	-	hcaE	b2538	0.43	+0.1
2,667,730	-	hcaE	b2538	0.50	-0.0
2,667,827	-	hcaE	b2538	0.57	+0.0
2,667,880	-	hcaE	b2538	0.61	-0.0