Strain Fitness in Escherichia coli BW25113 around b2510
Experiment: Ying_all64 rep C; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_all64 rep C; time point 2 |
---|---|---|---|---|---|
remove | |||||
2,632,658 | + | xseA | b2509 | 0.29 | -0.2 |
2,632,658 | + | xseA | b2509 | 0.29 | -1.1 |
2,632,670 | + | xseA | b2509 | 0.30 | +0.8 |
2,632,670 | + | xseA | b2509 | 0.30 | -0.2 |
2,632,688 | - | xseA | b2509 | 0.32 | -0.2 |
2,632,688 | - | +0.3 | |||
2,632,729 | + | xseA | b2509 | 0.35 | -0.0 |
2,632,729 | + | xseA | b2509 | 0.35 | -0.2 |
2,632,771 | - | xseA | b2509 | 0.38 | -0.4 |
2,632,911 | + | xseA | b2509 | 0.48 | +0.0 |
2,632,969 | + | xseA | b2509 | 0.52 | -0.3 |
2,633,042 | - | xseA | b2509 | 0.57 | -0.0 |
2,633,126 | + | xseA | b2509 | 0.64 | +0.5 |
2,633,166 | - | xseA | b2509 | 0.67 | +0.1 |
2,633,387 | + | xseA | b2509 | 0.83 | -0.0 |
2,633,387 | + | xseA | b2509 | 0.83 | -1.4 |
2,633,427 | - | xseA | b2509 | 0.86 | +0.1 |
2,633,427 | - | xseA | b2509 | 0.86 | -0.6 |
2,633,440 | + | xseA | b2509 | 0.87 | +0.1 |
2,633,691 | + | b2510 | b2510 | 0.32 | -0.8 |
2,633,721 | - | b2510 | b2510 | 0.46 | -0.1 |
2,633,787 | + | b2510 | b2510 | 0.77 | +0.8 |
2,633,787 | + | b2510 | b2510 | 0.77 | +1.6 |
2,633,795 | - | b2510 | b2510 | 0.81 | +0.2 |
2,633,805 | - | b2510 | b2510 | 0.85 | +0.6 |
Or see this region's nucleotide sequence