Strain Fitness in Escherichia coli BW25113 around b1723

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
1,803,483	+	ydiY	b1722	0.18	+2.7
1,803,550	+	ydiY	b1722	0.26	-0.4
1,803,588	-	ydiY	b1722	0.31	+0.1
1,803,589	-	ydiY	b1722	0.32	+0.0
1,803,613	+	ydiY	b1722	0.35	+0.2
1,803,642	-	ydiY	b1722	0.39	+0.4
1,803,644	-	ydiY	b1722	0.39	-0.1
1,803,669	-	ydiY	b1722	0.42	+0.2
1,803,672	-	ydiY	b1722	0.43	-0.4
1,803,672	-	ydiY	b1722	0.43	-0.3
1,803,870	-	ydiY	b1722	0.69	-0.3
1,803,889	-	ydiY	b1722	0.71	-0.3
1,803,889	-	ydiY	b1722	0.71	-0.0
1,803,889	-	ydiY	b1722	0.71	-0.1
1,803,889	-	ydiY	b1722	0.71	-0.5
1,803,896	-	ydiY	b1722	0.72	+0.1
1,803,938	+	ydiY	b1722	0.78	-0.8
1,803,997	+	ydiY	b1722	0.85	-0.4
1,803,997	+	ydiY	b1722	0.85	+0.9
1,804,005	-	ydiY	b1722	0.86	-0.8
1,804,005	-	ydiY	b1722	0.86	+2.3
1,804,006	+	ydiY	b1722	0.87	-0.4
1,804,014	-	ydiY	b1722	0.88	-0.0
1,804,014	-	ydiY	b1722	0.88	-0.9
1,804,089	+				+0.2
1,804,413	-				-0.2
1,804,413	-				-0.1
1,804,490	-	pfkB	b1723	0.10	+0.2
1,804,501	-	pfkB	b1723	0.12	+1.0
1,804,635	+	pfkB	b1723	0.26	-0.2
1,804,635	+	pfkB	b1723	0.26	+0.2
1,804,785	+	pfkB	b1723	0.42	+0.3
1,804,911	+	pfkB	b1723	0.56	+0.0
1,804,911	+	pfkB	b1723	0.56	+0.6
1,804,911	+	pfkB	b1723	0.56	-0.1
1,805,063	+	pfkB	b1723	0.72	+0.9
1,805,063	+	pfkB	b1723	0.72	+0.8
1,805,077	-	pfkB	b1723	0.73	-0.5
1,805,136	-	pfkB	b1723	0.80	+0.4
1,805,145	+	pfkB	b1723	0.81	+0.6
1,805,355	+				-0.2
1,805,471	-	ydiZ	b1724	0.16	-0.2
1,805,648	-	ydiZ	b1724	0.77	-0.7
1,805,853	+				-0.2
1,805,863	-				+2.7
1,805,863	-				-0.4
1,805,980	-	yniA	b1725	0.19	+0.1
1,806,165	-	yniA	b1725	0.40	-0.3
1,806,217	-	yniA	b1725	0.46	+0.8