Strain Fitness in Escherichia coli BW25113 around b1480

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
1,553,155	+	sfcA	b1479	0.68	-0.5
1,553,284	-	sfcA	b1479	0.76	-0.5
1,553,427	+	sfcA	b1479	0.84	+0.2
1,553,435	-	sfcA	b1479	0.85	+0.3
1,553,588	+				+0.2
1,553,636	+				-0.2
1,553,636	+				+0.3
1,553,638	+				-0.4
1,553,647	+				+0.2
1,553,700	-				-0.0
1,553,833	+				-0.1
1,553,833	+				-0.4
1,553,951	+	sra	b1480	0.73	+0.2
1,553,951	+	sra	b1480	0.73	-1.1
1,553,951	+	sra	b1480	0.73	+1.2
1,554,079	+				-0.7
1,554,082	-				-0.1
1,554,097	-				-0.0
1,554,101	+				-0.5
1,554,111	-	b1481	b1481	0.10	+0.1
1,554,111	-	b1481	b1481	0.10	-0.8
1,554,123	-	b1481	b1481	0.16	-0.3
1,554,132	+	b1481	b1481	0.20	+0.5
1,554,144	-	b1481	b1481	0.25	-0.4
1,554,218	+	b1481	b1481	0.60	+0.4
1,554,224	-	b1481	b1481	0.62	+2.2
1,554,224	-	b1481	b1481	0.62	-0.1
1,554,244	-	b1481	b1481	0.72	+1.2
1,554,249	+	b1481	b1481	0.74	-0.2
1,554,257	-	b1481	b1481	0.78	+1.2
1,554,273	+	b1481	b1481	0.85	+0.1
1,554,355	-				+2.2
1,554,365	+				-0.8
1,554,407	+				+2.2
1,554,407	+				+1.2
1,554,599	+				+1.7
1,554,599	+				+0.2
1,554,601	+				+0.4
1,554,639	-				+0.4
1,554,678	+				+0.1
1,554,678	-				+0.4
1,554,684	-				+0.2
1,554,697	+	osmC	b1482	0.11	-0.6
1,554,707	+	osmC	b1482	0.13	+1.0
1,554,718	+	osmC	b1482	0.16	+1.0
1,554,723	-	osmC	b1482	0.17	+0.4