Strain Fitness in Escherichia coli BW25113 around b1415

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
1,485,446	+	ydcF	b1414	0.23	+0.8
1,485,502	+	ydcF	b1414	0.30	+0.1
1,485,553	-	ydcF	b1414	0.37	-0.1
1,485,833	+	ydcF	b1414	0.72	-0.0
1,485,869	-	ydcF	b1414	0.76	+0.1
1,485,881	+	ydcF	b1414	0.78	-0.3
1,485,881	+	ydcF	b1414	0.78	+0.4
1,485,887	-	ydcF	b1414	0.78	-0.4
1,485,899	-	ydcF	b1414	0.80	-0.1
1,485,899	-	ydcF	b1414	0.80	+0.3
1,486,182	-				+0.3
1,486,274	-				+0.2
1,486,276	-				-0.4
1,486,276	-				+0.3
1,486,392	+				+0.4
1,486,392	+				+0.0
1,486,401	-	aldA	b1415	0.10	+0.1
1,486,401	-	aldA	b1415	0.10	-0.3
1,486,721	-	aldA	b1415	0.32	+0.4
1,486,932	+	aldA	b1415	0.47	+1.1
1,486,932	+	aldA	b1415	0.47	-0.0
1,487,097	+	aldA	b1415	0.58	+0.3
1,487,294	-	aldA	b1415	0.72	+0.4
1,487,351	-	aldA	b1415	0.76	+0.5
1,487,490	+	aldA	b1415	0.86	-0.0
1,487,801	+				-0.3
1,487,801	+				+0.0
1,487,921	+	gapC	b4493	0.18	-0.3
1,488,063	-	gapC	b4493	0.33	+0.7
1,488,092	-	gapC	b4493	0.35	+0.9
1,488,654	-				-0.1
1,488,684	+				-0.1
1,488,684	+				+0.3