Strain Fitness in Escherichia coli BW25113 around b1134
Experiment: Ying_all64 rep C; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_all64 rep C; time point 2 |
---|---|---|---|---|---|
remove | |||||
1,193,336 | - | ymfB | b1134 | 0.62 | +0.5 |
1,193,439 | - | ymfB | b1134 | 0.84 | +0.3 |
1,193,469 | + | +0.0 | |||
1,193,558 | - | +0.3 | |||
1,193,669 | - | ymfC | b1135 | 0.23 | +0.3 |
1,193,697 | - | ymfC | b1135 | 0.27 | -0.1 |
1,193,774 | - | ymfC | b1135 | 0.39 | -0.1 |
1,193,778 | + | ymfC | b1135 | 0.39 | +0.2 |
1,193,780 | - | ymfC | b1135 | 0.40 | -0.1 |
1,193,825 | + | ymfC | b1135 | 0.46 | +0.1 |
1,193,886 | - | ymfC | b1135 | 0.56 | -0.6 |
Or see this region's nucleotide sequence