Strain Fitness in Escherichia coli BW25113 around b1119

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
1,177,788	+				-0.2
1,177,791	-				-0.3
1,177,988	-	nagK	b1119	0.19	+0.2
1,177,988	-	nagK	b1119	0.19	+0.2
1,178,081	+	nagK	b1119	0.29	+0.1
1,178,086	+	nagK	b1119	0.30	-0.1
1,178,100	+	nagK	b1119	0.31	+0.3
1,178,411	-	nagK	b1119	0.65	+1.1
1,178,423	+	nagK	b1119	0.67	+0.1
1,178,423	+	nagK	b1119	0.67	+1.8
1,178,483	+	nagK	b1119	0.73	+0.1
1,178,486	-	nagK	b1119	0.73	-0.0
1,178,567	-	nagK	b1119	0.82	+0.3
1,178,692	-				+0.4
1,178,693	+				+0.3
1,178,708	+				-0.1
1,178,708	+				+0.1
1,178,766	+				+0.5
1,178,766	+				+0.7
1,178,875	+				+0.7
1,178,875	+				-0.2
1,178,880	-				+1.7
1,178,880	-				-2.6
1,179,036	-	cobB	b1120	0.25	-0.4
1,179,142	+	cobB	b1120	0.40	+0.5
1,179,161	+	cobB	b1120	0.42	-0.1
1,179,161	+	cobB	b1120	0.42	+0.3
1,179,195	-	cobB	b1120	0.47	-0.4
1,179,319	+	cobB	b1120	0.64	+0.2
1,179,396	+	cobB	b1120	0.74	+0.1
1,179,413	+	cobB	b1120	0.77	-0.4
1,179,413	+	cobB	b1120	0.77	+1.0
1,179,421	-	cobB	b1120	0.78	+0.1
1,179,526	+				+0.2
1,179,552	-				+2.4
1,179,584	+				+0.7
1,179,584	+				+0.1
1,179,584	+				+0.7
1,179,594	+				-0.1