Strain Fitness in Escherichia coli BW25113 around b1070
Experiment: Ying_all64 rep C; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_all64 rep C; time point 2 |
---|---|---|---|---|---|
remove | |||||
1,128,553 | + | +0.3 | |||
1,128,592 | + | +0.1 | |||
1,128,600 | - | -1.1 | |||
1,128,612 | + | -0.2 | |||
1,128,932 | - | flgN | b1070 | 0.71 | +0.8 |
1,129,057 | + | +0.3 | |||
1,129,094 | - | flgM | b1071 | 0.12 | -0.2 |
1,129,303 | + | flgM | b1071 | 0.83 | -0.1 |
1,129,414 | - | -0.1 | |||
1,129,433 | - | -0.8 | |||
1,129,433 | - | +1.3 | |||
1,129,579 | + | flgA | b1072 | 0.23 | +0.1 |
1,129,663 | + | flgA | b1072 | 0.36 | -0.2 |
1,129,716 | + | flgA | b1072 | 0.44 | +0.7 |
1,129,771 | + | flgA | b1072 | 0.52 | +0.4 |
1,129,771 | + | flgA | b1072 | 0.52 | -0.1 |
1,129,810 | + | flgA | b1072 | 0.58 | +0.4 |
1,129,811 | - | flgA | b1072 | 0.58 | -0.5 |
1,129,813 | + | flgA | b1072 | 0.58 | -0.2 |
1,129,815 | + | flgA | b1072 | 0.59 | +0.5 |
1,129,815 | + | flgA | b1072 | 0.59 | +0.1 |
1,129,958 | + | flgA | b1072 | 0.80 | -0.6 |
1,130,045 | + | -0.0 |
Or see this region's nucleotide sequence