Strain Fitness in Escherichia coli BW25113 around b0991

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
1,050,149	+				-0.0
1,050,154	+				+0.1
1,050,164	+				+0.0
1,050,180	+				-0.3
1,050,180	+				-0.4
1,050,184	+				-0.7
1,050,184	+				-0.3
1,050,184	+				-0.1
1,050,184	+				-0.1
1,050,194	+				+0.4
1,050,194	+				-0.3
1,050,211	+	cspH	b0989	0.12	+0.3
1,050,211	+	cspH	b0989	0.12	-0.4
1,050,226	+	cspH	b0989	0.19	-0.0
1,050,254	+	cspH	b0989	0.32	+1.9
1,050,254	+	cspH	b0989	0.32	-0.9
1,050,269	+	cspH	b0989	0.39	-0.4
1,050,269	+	cspH	b0989	0.39	+0.6
1,050,277	-	cspH	b0989	0.43	+2.5
1,050,277	-	cspH	b0989	0.43	+2.5
1,050,336	+	cspH	b0989	0.70	-0.4
1,050,349	+	cspH	b0989	0.77	+1.5
1,050,398	+				+2.5
1,050,398	+				+2.5
1,050,435	-				+1.5
1,050,435	-				+2.5
1,050,516	+				+1.5
1,050,565	-				+0.1
1,050,590	+				+0.8
1,050,613	+				-0.2
1,050,613	+				-0.1
1,050,733	+	cspG	b0990	0.23	-0.4
1,050,756	-	cspG	b0990	0.34	-1.0
1,050,756	-	cspG	b0990	0.34	-0.2
1,050,883	+				+0.1
1,050,944	+				-0.1
1,050,944	+				+0.2
1,050,949	+				+0.5
1,050,949	+				+0.5
1,050,949	+				+0.2
1,050,955	-				-0.2
1,050,957	-				-0.2
1,050,970	-				+0.2
1,051,100	-	ymcE	b0991	0.13	-0.4
1,051,100	-	ymcE	b0991	0.13	-0.0
1,051,107	+	ymcE	b0991	0.16	+1.5
1,051,107	+	ymcE	b0991	0.16	+0.2
1,051,149	+	ymcE	b0991	0.34	+0.9
1,051,149	+	ymcE	b0991	0.34	+0.7
1,051,151	+	ymcE	b0991	0.35	+1.1
1,051,161	-	ymcE	b0991	0.39	+0.6
1,051,161	-	ymcE	b0991	0.39	+0.5
1,051,203	+	ymcE	b0991	0.58	+0.9
1,051,203	+	ymcE	b0991	0.58	+0.1
1,051,228	+	ymcE	b0991	0.68	-1.8
1,051,255	-	ymcE	b0991	0.80	+0.4
1,051,480	-				-0.5
1,051,591	-				-0.0
1,051,631	-	yccM	b0992	0.11	-0.1
1,051,640	+	yccM	b0992	0.12	-0.2
1,051,714	-	yccM	b0992	0.19	-0.4
1,051,717	+	yccM	b0992	0.19	+0.0
1,051,735	-	yccM	b0992	0.21	-0.4
1,051,770	-	yccM	b0992	0.24	+0.5
1,051,872	-	yccM	b0992	0.34	-0.6
1,051,923	+	yccM	b0992	0.38	-0.1
1,051,923	+	yccM	b0992	0.38	-0.1
1,051,940	-	yccM	b0992	0.40	+0.4
1,051,968	+	yccM	b0992	0.42	-0.0
1,052,009	+	yccM	b0992	0.46	-0.1
1,052,029	+	yccM	b0992	0.48	-1.5
1,052,073	+	yccM	b0992	0.52	-0.2
1,052,124	-	yccM	b0992	0.57	+0.1
1,052,175	+	yccM	b0992	0.62	-0.0