Strain Fitness in Escherichia coli BW25113 around b3023

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
3,165,775	+				-0.8
3,165,784	-				-0.5
3,165,798	+				-0.5
3,165,798	+				+0.1
3,165,822	+				-1.6
3,165,822	+				+0.2
3,165,895	+				-1.3
3,165,903	+				+0.7
3,165,914	-	ygiT	b3021	0.10	-3.8
3,165,946	-	ygiT	b3021	0.18	+0.4
3,165,950	-	ygiT	b3021	0.19	-2.3
3,165,950	-	ygiT	b3021	0.19	-2.3
3,165,985	-	ygiT	b3021	0.28	-2.5
3,166,018	-	ygiT	b3021	0.37	-2.1
3,166,093	+	ygiT	b3021	0.56	+1.2
3,166,285	-				-0.0
3,166,285	-				-0.2
3,166,286	-				+0.2
3,166,290	-				+0.0
3,166,290	-				-2.4
3,166,299	-				-0.7
3,166,308	-	b3022	b3022	0.13	+0.2
3,166,308	-	b3022	b3022	0.13	-0.2
3,166,325	-	b3022	b3022	0.19	-0.0
3,166,330	-	b3022	b3022	0.20	-0.1
3,166,330	-	b3022	b3022	0.20	+0.3
3,166,335	-	b3022	b3022	0.22	-0.2
3,166,337	+	b3022	b3022	0.23	+1.2
3,166,345	-	b3022	b3022	0.25	-0.6
3,166,345	-	b3022	b3022	0.25	+0.2
3,166,346	-	b3022	b3022	0.26	-0.2
3,166,357	-	b3022	b3022	0.29	-0.8
3,166,370	+	b3022	b3022	0.34	-1.4
3,166,376	-	b3022	b3022	0.36	-0.5
3,166,377	+	b3022	b3022	0.36	+1.4
3,166,382	+	b3022	b3022	0.38	+1.6
3,166,382	+	b3022	b3022	0.38	+0.8
3,166,388	-	b3022	b3022	0.40	-0.2
3,166,388	-	b3022	b3022	0.40	-0.2
3,166,390	-	b3022	b3022	0.40	+0.0
3,166,420	-	b3022	b3022	0.51	-0.5
3,166,441	-	b3022	b3022	0.58	-0.2
3,166,480	-	b3022	b3022	0.71	-0.2
3,166,480	-	b3022	b3022	0.71	+0.9
3,166,523	+	b3022	b3022	0.85	+0.1
3,166,539	+				-0.2
3,166,551	-				-0.5
3,166,551	-				-0.8
3,166,551	-				+0.4
3,166,576	-				+0.3
3,166,576	-				-0.2
3,166,696	-				-0.8
3,166,703	+				-0.4
3,166,703	+				-0.1
3,166,771	-				+0.3
3,166,795	-				+0.2
3,166,795	-				-0.4
3,166,843	+	ygiV	b3023	0.15	+0.1
3,166,909	-	ygiV	b3023	0.29	+0.5
3,166,956	-	ygiV	b3023	0.38	+0.4
3,166,956	-	ygiV	b3023	0.38	+0.4
3,166,989	+	ygiV	b3023	0.45	+0.4
3,166,989	+	ygiV	b3023	0.45	-0.1
3,167,060	+	ygiV	b3023	0.60	-0.3
3,167,154	+	ygiV	b3023	0.79	+0.6
3,167,158	+	ygiV	b3023	0.80	-0.3
3,167,175	+	ygiV	b3023	0.84	+1.3
3,167,175	+	ygiV	b3023	0.84	+0.5
3,167,175	+	ygiV	b3023	0.84	+0.5
3,167,192	+	ygiV	b3023	0.87	-0.0
3,167,227	+				-0.6
3,167,422	-	ygiW	b3024	0.30	-0.4
3,167,470	+	ygiW	b3024	0.42	+0.6
3,167,470	+	ygiW	b3024	0.42	-0.4
3,167,470	+	ygiW	b3024	0.42	+1.8
3,167,478	-	ygiW	b3024	0.44	-0.0
3,167,478	-	ygiW	b3024	0.44	+0.3
3,167,500	-	ygiW	b3024	0.49	+1.2
3,167,500	-	ygiW	b3024	0.49	-1.0
3,167,512	+	ygiW	b3024	0.52	+0.6
3,167,652	+	ygiW	b3024	0.88	+0.2
3,167,718	-				-0.1
3,167,793	-				-0.2
3,167,793	-				+0.0
3,167,798	+				+0.3
3,167,800	+				+0.4
3,167,800	+				+0.0
3,167,800	+				+0.2
3,167,979	+	qseB	b3025	0.20	+0.6
3,167,987	-	qseB	b3025	0.21	-0.7
3,167,987	-	qseB	b3025	0.21	+0.7
3,168,014	-	qseB	b3025	0.25	+0.5
3,168,014	-	qseB	b3025	0.25	-0.3
3,168,045	+	qseB	b3025	0.30	+0.5
3,168,096	+	qseB	b3025	0.37	-0.1
3,168,108	+	qseB	b3025	0.39	-0.1
3,168,112	+	qseB	b3025	0.40	+0.2
3,168,179	-	qseB	b3025	0.50	-0.0
3,168,192	+	qseB	b3025	0.52	-0.3
3,168,235	+	qseB	b3025	0.58	+0.1