Strain Fitness in Escherichia coli BW25113 around b3271

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
3,419,462	-	yhdY	b3270	0.10	+0.0
3,419,462	-	yhdY	b3270	0.10	-0.0
3,419,500	+	yhdY	b3270	0.14	+0.4
3,419,578	+	yhdY	b3270	0.21	+0.4
3,419,578	+	yhdY	b3270	0.21	-0.4
3,419,578	+	yhdY	b3270	0.21	+0.1
3,419,580	-	yhdY	b3270	0.21	+0.4
3,419,580	-	yhdY	b3270	0.21	+0.2
3,419,671	+	yhdY	b3270	0.29	+0.1
3,419,671	+	yhdY	b3270	0.29	+0.1
3,419,671	+	yhdY	b3270	0.29	-1.3
3,419,671	+	yhdY	b3270	0.29	+1.0
3,419,674	-	yhdY	b3270	0.30	-1.0
3,419,674	-	yhdY	b3270	0.30	+0.4
3,419,741	+	yhdY	b3270	0.36	+0.6
3,419,805	-	yhdY	b3270	0.41	-0.3
3,419,814	+	yhdY	b3270	0.42	+0.7
3,419,868	+	yhdY	b3270	0.47	-0.4
3,419,881	+	yhdY	b3270	0.48	+0.2
3,419,911	-	yhdY	b3270	0.51	+0.6
3,419,911	-	yhdY	b3270	0.51	+0.1
3,419,979	+	yhdY	b3270	0.57	+0.1
3,420,064	-	yhdY	b3270	0.65	-0.2
3,420,083	-	yhdY	b3270	0.67	-0.1
3,420,117	+	yhdY	b3270	0.70	+0.1
3,420,256	+	yhdY	b3270	0.82	+0.3
3,420,306	+	yhdY	b3270	0.87	-0.1
3,420,423	+				-0.2
3,420,423	+				-1.5
3,420,431	-				+0.1
3,420,434	+				+0.3
3,420,434	+				-0.4
3,420,627	+	yhdZ	b3271	0.22	+0.4
3,420,627	+	yhdZ	b3271	0.22	+0.7
3,420,734	+	yhdZ	b3271	0.36	+0.2
3,420,764	-	yhdZ	b3271	0.40	-0.3
3,420,786	-	yhdZ	b3271	0.43	-0.2
3,420,846	+	yhdZ	b3271	0.51	+0.6
3,420,849	+	yhdZ	b3271	0.52	+0.5
3,420,857	-	yhdZ	b3271	0.53	+0.7
3,420,857	-	yhdZ	b3271	0.53	+0.2
3,420,857	-	yhdZ	b3271	0.53	+0.5
3,420,924	+	yhdZ	b3271	0.61	-0.7
3,421,053	-	yhdZ	b3271	0.78	-0.1
3,421,176	-				+0.4