Strain Fitness in Escherichia coli BW25113 around b2659

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
2,786,143	+	ygaQ	b4462	0.77	+2.6
2,786,145	+	ygaQ	b4462	0.77	-1.8
2,786,145	+	ygaQ	b4462	0.77	+1.6
2,786,174	+	ygaQ	b4462	0.78	+1.0
2,786,176	+	ygaQ	b4462	0.78	+0.3
2,786,176	+	ygaQ	b4462	0.78	+1.6
2,786,177	+	ygaQ	b4462	0.78	+0.3
2,786,233	+	ygaQ	b4462	0.81	+2.6
2,786,233	+	ygaQ	b4462	0.81	+1.6
2,786,242	+	ygaQ	b4462	0.81	-1.0
2,786,254	+	ygaQ	b4462	0.81	+2.6
2,786,260	+	ygaQ	b4462	0.82	+2.6
2,786,293	+	ygaQ	b4462	0.83	+1.3
2,786,315	+	ygaQ	b4462	0.84	+2.6
2,786,421	+	ygaQ	b4462	0.89	+0.1
2,786,591	+				+1.6
2,786,597	-				+1.6
2,786,597	-				+0.7
2,786,647	+				+0.4
2,786,714	-				-0.1
2,786,727	-				+0.1
2,786,727	-				-0.1
2,786,731	-				-0.9
2,786,756	-				-0.1
2,786,792	-				+0.1
2,786,804	-				+0.1
2,786,804	-				+0.0
2,786,986	-				+0.2
2,786,988	+				-0.7
2,786,996	-				+0.7
2,787,071	+				+0.9
2,787,166	+	b2659	b2659	0.16	-0.2
2,787,166	+	b2659	b2659	0.16	+1.5
2,787,265	+	b2659	b2659	0.26	+0.2
2,787,737	-	b2659	b2659	0.75	-0.2
2,788,053	+				+0.7
2,788,138	+	ygaF	b2660	0.11	+0.4
2,788,165	+	ygaF	b2660	0.13	+0.5
2,788,227	-	ygaF	b2660	0.18	+0.3
2,788,250	+	ygaF	b2660	0.19	-0.4
2,788,269	-	ygaF	b2660	0.21	+0.2
2,788,322	-	ygaF	b2660	0.25	-0.1
2,788,324	-	ygaF	b2660	0.25	+0.2
2,788,324	-	ygaF	b2660	0.25	-0.3
2,788,349	-	ygaF	b2660	0.27	-0.1
2,788,551	+	ygaF	b2660	0.43	+0.7
2,788,551	+	ygaF	b2660	0.43	-0.3
2,788,665	-	ygaF	b2660	0.52	+0.1
2,788,753	-	ygaF	b2660	0.59	-0.4
2,788,753	-	ygaF	b2660	0.59	+0.3
2,788,861	+	ygaF	b2660	0.68	-0.7
2,788,861	+	ygaF	b2660	0.68	-0.5
2,788,931	-	ygaF	b2660	0.73	+0.2