Strain Fitness in Escherichia coli BW25113 around b1399

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
1,461,222	-	paaK	b1398	0.82	+0.8
1,461,441	+				-0.4
1,461,562	+				+0.6
1,461,562	+				+0.1
1,461,638	+				+0.5
1,461,687	+	paaX	b1399	0.13	+0.8
1,461,873	+	paaX	b1399	0.33	+0.3
1,461,873	+	paaX	b1399	0.33	-1.2
1,461,938	+	paaX	b1399	0.39	+0.7
1,461,978	+	paaX	b1399	0.44	+0.6
1,462,399	-	paaX	b1399	0.88	+0.1
1,462,521	+				-2.4
1,462,521	+				-0.1
1,462,975	+	paaY	b1400	0.81	+1.1
1,462,975	+	paaY	b1400	0.81	+0.2
1,462,988	+	paaY	b1400	0.83	-0.4
1,463,000	+	paaY	b1400	0.85	-0.4
1,463,053	+				-0.2
1,463,053	+				-0.1
1,463,080	+				-0.5
1,463,082	+				+0.3
1,463,499	-				+1.2
1,463,499	-				+1.2