Strain Fitness in Escherichia coli BW25113 around b1164

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
1,214,067	+	ycgF	b1163	0.48	+0.7
1,214,067	+	ycgF	b1163	0.48	+0.8
1,214,151	-	ycgF	b1163	0.55	+2.3
1,214,190	+	ycgF	b1163	0.58	+1.0
1,214,190	+	ycgF	b1163	0.58	-1.0
1,214,194	-	ycgF	b1163	0.58	+1.3
1,214,203	+	ycgF	b1163	0.59	-0.3
1,214,203	+	ycgF	b1163	0.59	-0.3
1,214,203	+	ycgF	b1163	0.59	-0.1
1,214,257	+	ycgF	b1163	0.64	-0.8
1,214,366	+	ycgF	b1163	0.73	-0.5
1,214,460	+	ycgF	b1163	0.80	+0.1
1,214,460	-	ycgF	b1163	0.80	+3.9
1,214,478	+	ycgF	b1163	0.82	+0.3
1,214,541	-	ycgF	b1163	0.87	+0.7
1,214,575	+	ycgF	b1163	0.90	+2.3
1,214,590	-				-0.2
1,214,596	-				+1.3
1,214,612	-				-0.3
1,214,614	+				+0.9
1,214,614	+				-0.1
1,214,617	-				-0.1
1,214,718	-				-0.5
1,214,718	-				+0.2
1,214,730	-				-0.1
1,214,730	-				+0.8
1,214,730	-				+1.2
1,214,789	+				+2.3
1,215,133	+	ycgZ	b1164	0.51	+1.0
1,215,188	+	ycgZ	b1164	0.74	+1.3
1,215,190	+	ycgZ	b1164	0.75	-0.0
1,215,288	+				+2.3
1,215,346	+	ymgA	b1165	0.20	+0.3
1,215,347	+	ymgA	b1165	0.21	+1.3
1,215,349	+	ymgA	b1165	0.21	-0.3
1,216,034	+	ymgC	b1167	0.25	+2.3
1,216,162	+	ymgC	b1167	0.77	+2.3
1,216,213	+				+0.3
1,216,243	+				+2.3