Strain Fitness in Escherichia coli BW25113 around b1080

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
1,134,598	-	flgG	b1078	0.83	+0.8
1,134,598	-	flgG	b1078	0.83	-0.8
1,134,700	-				-0.2
1,134,752	+				-0.4
1,134,854	-				+0.8
1,134,857	+	flgH	b1079	0.10	+0.1
1,134,893	+	flgH	b1079	0.15	-0.4
1,134,893	+	flgH	b1079	0.15	+0.8
1,134,901	-	flgH	b1079	0.16	+0.3
1,135,012	-	flgH	b1079	0.32	+0.9
1,135,101	+	flgH	b1079	0.45	+0.2
1,135,257	-	flgH	b1079	0.67	+0.3
1,135,634	-	flgI	b1080	0.12	+0.4
1,135,838	+	flgI	b1080	0.31	+0.2
1,135,849	+	flgI	b1080	0.32	+0.6
1,135,867	-	flgI	b1080	0.34	+0.7
1,135,913	-	flgI	b1080	0.38	+0.8
1,136,103	+	flgI	b1080	0.55	+0.2
1,136,129	-	flgI	b1080	0.58	+0.8
1,136,129	-	flgI	b1080	0.58	-0.0
1,136,165	-	flgI	b1080	0.61	-0.1
1,136,168	+	flgI	b1080	0.61	-0.0
1,136,312	-	flgI	b1080	0.74	-0.6
1,136,312	-	flgI	b1080	0.74	+0.4
1,136,319	+	flgI	b1080	0.75	+0.1
1,136,335	-	flgI	b1080	0.76	+0.2
1,136,399	+	flgI	b1080	0.82	+0.2
1,136,413	-	flgI	b1080	0.83	+0.3
1,136,451	+	flgI	b1080	0.87	+0.1
1,136,507	+				+0.3
1,136,507	+				+0.1
1,136,620	-				-0.4
1,136,622	-				-0.1
1,136,622	-				+0.4
1,136,776	+	flgJ	b1081	0.19	+0.2
1,136,776	+	flgJ	b1081	0.19	-0.5
1,136,810	+	flgJ	b1081	0.23	-0.3
1,136,810	+	flgJ	b1081	0.23	-0.5
1,136,821	+	flgJ	b1081	0.24	+0.0
1,136,854	-	flgJ	b1081	0.28	-0.2
1,136,867	-	flgJ	b1081	0.29	-0.6
1,136,957	-	flgJ	b1081	0.39	-0.3
1,137,015	-	flgJ	b1081	0.45	-1.0
1,137,015	-	flgJ	b1081	0.45	-0.3
1,137,122	-	flgJ	b1081	0.56	-0.7
1,137,373	-	flgJ	b1081	0.83	-0.1
1,137,452	+				+0.8