Strain Fitness in Escherichia coli BW25113 around b0001

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
70	+				-0.2
70	+				-0.4
78	-				-1.4
78	-				-0.3
161	-				-0.1
185	-				-0.2
185	-				-1.3
208	+	thrL	b0001	0.27	+0.2
217	-	thrL	b0001	0.41	+0.3
257	-				-0.4
257	-				-0.1
440	-				-0.1
440	-				-1.6
454	-				-1.3
518	-				-1.3
518	-				-0.9
528	+				+0.9
592	+	thrA	b0002	0.10	+0.4
592	+	thrA	b0002	0.10	-0.6
666	+	thrA	b0002	0.13	+0.2
666	+	thrA	b0002	0.13	+0.6
675	-	thrA	b0002	0.14	-0.7
754	-	thrA	b0002	0.17	-0.6
754	-	thrA	b0002	0.17	-0.3
767	+	thrA	b0002	0.17	-0.5
775	-	thrA	b0002	0.18	-1.5
957	+	thrA	b0002	0.25	-0.6
957	+	thrA	b0002	0.25	-1.5
1,046	+	thrA	b0002	0.29	-0.1
1,136	-	thrA	b0002	0.32	-0.3
1,142	-	thrA	b0002	0.33	-0.1
1,161	+	thrA	b0002	0.33	-0.3
1,161	+	thrA	b0002	0.33	-0.0
1,161	+	thrA	b0002	0.33	-1.6