Strain Fitness in Escherichia coli BW25113 around b2629

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
2,762,545	+	yfjL	b2628	0.61	+0.7
2,762,545	+	yfjL	b2628	0.61	-0.1
2,762,555	-	yfjL	b2628	0.62	-0.2
2,762,555	-	yfjL	b2628	0.62	-0.4
2,762,626	+	yfjL	b2628	0.66	-0.8
2,762,860	+	yfjL	b2628	0.80	+0.2
2,762,878	+	yfjL	b2628	0.82	+0.3
2,762,881	-	yfjL	b2628	0.82	-0.1
2,762,881	-	yfjL	b2628	0.82	+0.4
2,762,891	-	yfjL	b2628	0.82	-0.2
2,762,918	+	yfjL	b2628	0.84	-0.4
2,762,982	+	yfjL	b2628	0.88	+0.0
2,763,052	-				+0.1
2,763,059	+				+0.4
2,763,074	-				-0.6
2,763,104	-				-0.0
2,763,119	+				-0.5
2,763,137	+				+0.6
2,763,173	+				+0.3
2,763,265	-				-0.1
2,763,265	-				-0.1
2,763,365	+				+0.2
2,763,411	+				-0.2
2,763,445	+				+0.4
2,763,445	+				+0.3
2,763,561	-				-0.1
2,763,561	-				+0.7
2,763,588	-	yfjM	b2629	0.20	+0.2
2,763,611	-	yfjM	b2629	0.29	+0.3
2,763,621	-	yfjM	b2629	0.33	+0.4
2,763,642	+	yfjM	b2629	0.41	+0.7
2,763,650	-	yfjM	b2629	0.44	+0.3
2,763,652	+	yfjM	b2629	0.44	+0.0
2,763,758	+	yfjM	b2629	0.84	-0.2
2,763,758	+	yfjM	b2629	0.84	-0.1
2,763,833	+				-0.1
2,763,833	+				-0.3
2,763,836	+				-0.0
2,763,836	+				-1.3
2,763,841	-				-0.5
2,763,844	-				+0.1
2,763,844	-				+0.5
2,763,851	+				-0.2
2,763,921	+				-0.1
2,764,043	+				+0.2
2,764,082	+	yfjN	b2630	0.13	-0.5
2,764,093	+	yfjN	b2630	0.14	+0.5
2,764,093	+	yfjN	b2630	0.14	-0.3
2,764,188	+	yfjN	b2630	0.23	-0.1
2,764,188	-	yfjN	b2630	0.23	-0.0
2,764,219	-	yfjN	b2630	0.26	+0.6
2,764,219	-	yfjN	b2630	0.26	+1.1
2,764,251	+	yfjN	b2630	0.29	+0.2
2,764,315	-	yfjN	b2630	0.35	-0.2
2,764,315	-	yfjN	b2630	0.35	+0.1
2,764,319	+	yfjN	b2630	0.35	-0.4
2,764,325	-	yfjN	b2630	0.36	+0.4
2,764,329	+	yfjN	b2630	0.36	+0.2
2,764,346	-	yfjN	b2630	0.38	+0.3
2,764,346	-	yfjN	b2630	0.38	-0.1
2,764,348	-	yfjN	b2630	0.38	-0.0
2,764,348	-	yfjN	b2630	0.38	-0.1
2,764,404	+	yfjN	b2630	0.43	-0.4
2,764,404	+	yfjN	b2630	0.43	-0.1
2,764,426	+	yfjN	b2630	0.45	+0.1
2,764,524	-	yfjN	b2630	0.54	+0.1
2,764,541	-	yfjN	b2630	0.56	+0.4
2,764,541	-	yfjN	b2630	0.56	+0.2
2,764,585	+	yfjN	b2630	0.60	+0.2
2,764,587	-	yfjN	b2630	0.60	+0.4
2,764,587	-	yfjN	b2630	0.60	+1.2
2,764,589	+	yfjN	b2630	0.60	-0.1
2,764,748	+	yfjN	b2630	0.75	-0.0
2,764,761	-	yfjN	b2630	0.76	-0.5