Strain Fitness in Escherichia coli BW25113 around b2452
Experiment: Ying_all64 rep A; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_all64 rep A; time point 2 |
---|---|---|---|---|---|
remove | |||||
2,563,913 | - | eutA | b2451 | 0.29 | -0.1 |
2,563,949 | - | eutA | b2451 | 0.32 | +0.1 |
2,564,001 | + | eutA | b2451 | 0.35 | +0.1 |
2,564,037 | - | eutA | b2451 | 0.38 | -0.1 |
2,564,285 | + | eutA | b2451 | 0.56 | -0.2 |
2,564,377 | - | eutA | b2451 | 0.62 | -0.1 |
2,564,443 | - | eutA | b2451 | 0.67 | +0.1 |
2,564,443 | - | eutA | b2451 | 0.67 | +0.0 |
2,564,498 | - | eutA | b2451 | 0.71 | -0.0 |
2,564,498 | - | eutA | b2451 | 0.71 | +0.5 |
2,564,577 | - | eutA | b2451 | 0.76 | -0.3 |
2,564,599 | + | eutA | b2451 | 0.78 | +0.2 |
2,564,626 | + | eutA | b2451 | 0.80 | -0.1 |
2,564,636 | - | eutA | b2451 | 0.81 | +0.2 |
2,564,636 | - | eutA | b2451 | 0.81 | -0.5 |
2,564,741 | + | eutA | b2451 | 0.88 | -0.2 |
2,564,743 | + | eutA | b2451 | 0.88 | +0.5 |
2,564,753 | - | eutA | b2451 | 0.89 | +0.2 |
2,564,865 | + | -0.3 | |||
2,565,050 | + | eutH | b2452 | 0.12 | -0.1 |
2,565,126 | + | eutH | b2452 | 0.18 | -0.1 |
2,565,171 | - | eutH | b2452 | 0.22 | +0.2 |
2,565,210 | - | eutH | b2452 | 0.25 | +0.1 |
2,565,259 | - | eutH | b2452 | 0.29 | -0.1 |
2,565,275 | + | eutH | b2452 | 0.30 | +0.1 |
2,565,275 | + | eutH | b2452 | 0.30 | +0.7 |
2,565,331 | + | eutH | b2452 | 0.35 | -0.2 |
2,565,353 | - | eutH | b2452 | 0.37 | -0.1 |
2,565,416 | + | eutH | b2452 | 0.42 | +0.2 |
2,565,454 | - | eutH | b2452 | 0.45 | +0.2 |
2,565,454 | - | eutH | b2452 | 0.45 | -0.3 |
2,565,593 | + | eutH | b2452 | 0.56 | +0.8 |
2,565,593 | + | eutH | b2452 | 0.56 | +0.4 |
2,565,770 | - | eutH | b2452 | 0.71 | +0.4 |
2,565,772 | - | eutH | b2452 | 0.71 | -0.0 |
2,565,783 | - | eutH | b2452 | 0.72 | +0.2 |
2,565,838 | - | eutH | b2452 | 0.76 | +0.4 |
2,565,840 | + | eutH | b2452 | 0.76 | +0.7 |
2,565,931 | + | eutH | b2452 | 0.84 | +0.4 |
2,565,948 | + | eutH | b2452 | 0.85 | +0.3 |
2,565,981 | + | eutH | b2452 | 0.88 | +0.1 |
2,565,981 | + | eutH | b2452 | 0.88 | +0.9 |
2,566,315 | + | +0.8 | |||
2,566,315 | + | +0.1 | |||
2,566,364 | + | -0.1 | |||
2,566,409 | - | +0.5 | |||
2,566,431 | + | -0.5 | |||
2,566,451 | - | -0.2 | |||
2,566,515 | + | eutG | b2453 | 0.14 | -0.0 |
2,566,522 | + | eutG | b2453 | 0.15 | +0.5 |
2,566,522 | + | eutG | b2453 | 0.15 | +0.0 |
2,566,585 | + | eutG | b2453 | 0.20 | -0.5 |
2,566,620 | + | eutG | b2453 | 0.23 | +0.3 |
2,566,620 | + | eutG | b2453 | 0.23 | -0.2 |
2,566,637 | + | eutG | b2453 | 0.24 | +0.1 |
2,566,894 | + | eutG | b2453 | 0.46 | -0.2 |
2,566,914 | + | eutG | b2453 | 0.48 | +0.0 |
2,566,938 | - | eutG | b2453 | 0.50 | +1.0 |
2,566,938 | - | eutG | b2453 | 0.50 | +0.2 |
2,566,938 | - | eutG | b2453 | 0.50 | +0.4 |
2,567,008 | + | eutG | b2453 | 0.56 | -0.1 |
2,567,012 | - | eutG | b2453 | 0.56 | -0.2 |
Or see this region's nucleotide sequence