Strain Fitness in Escherichia coli BW25113 around b2217

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
2,313,222	-	rcsD	b2216	0.64	+0.1
2,313,297	+	rcsD	b2216	0.67	-0.6
2,313,307	+	rcsD	b2216	0.67	+0.4
2,313,338	+	rcsD	b2216	0.68	+0.3
2,313,349	+	rcsD	b2216	0.69	-0.2
2,313,349	+	rcsD	b2216	0.69	-0.4
2,313,349	-	rcsD	b2216	0.69	-0.5
2,313,422	-	rcsD	b2216	0.72	-0.1
2,313,518	+	rcsD	b2216	0.75	+0.2
2,313,521	-	rcsD	b2216	0.75	+0.1
2,313,521	-	rcsD	b2216	0.75	+0.0
2,313,525	+	rcsD	b2216	0.75	+0.3
2,313,525	+	rcsD	b2216	0.75	-0.5
2,313,590	-	rcsD	b2216	0.78	+0.4
2,313,598	+	rcsD	b2216	0.78	-0.8
2,313,671	-	rcsD	b2216	0.81	+0.3
2,313,741	-	rcsD	b2216	0.83	+0.4
2,313,750	-	rcsD	b2216	0.84	-0.3
2,313,807	+	rcsD	b2216	0.86	-0.1
2,313,959	+				+0.4
2,314,038	+				-0.2
2,314,038	-				+0.7
2,314,102	+				-0.2
2,314,202	-				+0.2
2,314,311	+	rcsB	b2217	0.17	+0.3
2,314,319	+	rcsB	b2217	0.18	-0.0
2,314,323	+	rcsB	b2217	0.19	+0.4
2,314,362	-	rcsB	b2217	0.25	+0.4
2,314,362	-	rcsB	b2217	0.25	+0.3
2,314,439	-	rcsB	b2217	0.37	-0.2
2,314,439	-	rcsB	b2217	0.37	+0.6
2,314,490	+	rcsB	b2217	0.45	-0.2
2,314,490	+	rcsB	b2217	0.45	+0.2
2,314,565	+	rcsB	b2217	0.56	+0.5
2,314,599	+	rcsB	b2217	0.61	+0.2
2,314,773	+	rcsB	b2217	0.88	+0.3
2,314,812	-				+0.5
2,315,032	-				+0.2
2,315,045	-				-0.3
2,315,139	+				+0.5
2,315,341	+	rcsC	b2218	0.10	+0.1
2,315,548	+	rcsC	b2218	0.18	+0.1
2,315,559	-	rcsC	b2218	0.18	+0.5
2,315,678	+	rcsC	b2218	0.22	+1.1
2,315,702	+	rcsC	b2218	0.23	+0.4
2,315,745	+	rcsC	b2218	0.24	-1.0
2,315,782	+	rcsC	b2218	0.26	-0.5
2,315,785	-	rcsC	b2218	0.26	-0.1
2,315,785	-	rcsC	b2218	0.26	+0.2