Strain Fitness in Escherichia coli BW25113 around b1950

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
2,019,995	+	fliP	b1948	0.14	+0.2
2,020,000	+	fliP	b1948	0.14	+0.2
2,020,231	-	fliP	b1948	0.46	+0.1
2,020,359	-	fliP	b1948	0.63	-0.1
2,020,359	-	fliP	b1948	0.63	-0.3
2,020,375	+	fliP	b1948	0.65	+0.3
2,020,382	-	fliP	b1948	0.66	+0.3
2,020,668	+	fliQ	b1949	0.10	+0.4
2,020,719	-	fliQ	b1949	0.29	+0.3
2,020,840	+	fliQ	b1949	0.74	+0.1
2,020,894	+				+0.4
2,020,899	-				+0.1
2,020,950	-				+0.1
2,021,298	+	fliR	b1950	0.48	+0.3
2,021,377	+	fliR	b1950	0.59	+0.7
2,021,377	+	fliR	b1950	0.59	+0.5
2,021,413	-	fliR	b1950	0.63	+0.3
2,021,498	+	fliR	b1950	0.74	+0.5
2,021,501	+	fliR	b1950	0.74	+0.7
2,021,501	+	fliR	b1950	0.74	+0.4
2,021,522	-	fliR	b1950	0.77	+2.1
2,021,572	+	fliR	b1950	0.83	+1.5
2,021,594	+	fliR	b1950	0.86	+1.1
2,021,594	+	fliR	b1950	0.86	+2.4
2,021,595	+	fliR	b1950	0.86	-1.0
2,021,595	+	fliR	b1950	0.86	+0.9
2,021,812	-				+3.7
2,021,982	+				+2.1
2,021,982	+				+2.1
2,022,049	+				+0.1
2,022,191	+	rcsA	b1951	0.32	+0.5
2,022,382	-	rcsA	b1951	0.62	+3.1
2,022,382	-	rcsA	b1951	0.62	+1.7
2,022,413	-	rcsA	b1951	0.67	-1.6
2,022,413	-	rcsA	b1951	0.67	+0.5
2,022,424	-	rcsA	b1951	0.69	+1.1
2,022,424	-	rcsA	b1951	0.69	+0.5
2,022,427	-	rcsA	b1951	0.70	-0.9
2,022,435	+	rcsA	b1951	0.71	+2.1
2,022,453	-	rcsA	b1951	0.74	-0.3
2,022,456	-	rcsA	b1951	0.74	-0.2
2,022,610	+				+1.1
2,022,610	+				+0.8
2,022,627	-				-0.0
2,022,637	-				-0.1
2,022,650	-				+0.0
2,022,650	-				-0.6
2,022,674	-				-0.6
2,022,674	-				+0.6
2,022,694	+	dsrB	b1952	0.19	+0.7
2,022,694	+	dsrB	b1952	0.19	+1.0