Strain Fitness in Escherichia coli BW25113 around b1465

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
1,533,034	+				+0.3
1,533,090	-	yddE	b1464	0.11	+0.3
1,533,090	-	yddE	b1464	0.11	+0.4
1,533,171	+	yddE	b1464	0.20	+0.7
1,533,171	+	yddE	b1464	0.20	+0.5
1,533,174	-	yddE	b1464	0.21	-0.1
1,533,177	+	yddE	b1464	0.21	+0.0
1,533,195	+	yddE	b1464	0.23	+0.9
1,533,195	+	yddE	b1464	0.23	+0.4
1,533,288	-	yddE	b1464	0.33	+0.3
1,533,377	-	yddE	b1464	0.43	+0.1
1,533,377	-	yddE	b1464	0.43	-0.1
1,533,643	-	yddE	b1464	0.73	-0.1
1,533,650	+	yddE	b1464	0.74	+0.1
1,533,735	+	yddE	b1464	0.83	+0.4
1,533,892	+				+0.4
1,533,947	-				-0.0
1,534,325	-	narV	b1465	0.53	+0.1
1,534,336	+	narV	b1465	0.55	+0.6
1,534,625	+				+0.2
1,534,659	+				-0.4
1,534,659	+				+0.0
1,534,776	+	narW	b1466	0.20	-0.2
1,535,009	+	narW	b1466	0.53	+0.1
1,535,035	-	narW	b1466	0.57	-0.2
1,535,064	-	narW	b1466	0.61	-0.0
1,535,075	+	narW	b1466	0.63	-0.4
1,535,172	-	narW	b1466	0.77	-0.0
1,535,310	+				-0.1
1,535,352	-				-0.1
1,535,352	-				-0.4
1,535,359	+				+0.6
1,535,563	+	narY	b1467	0.15	+0.3
1,535,583	-	narY	b1467	0.16	-0.2