Strain Fitness in Escherichia coli BW25113 around b1406

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
1,471,353	+				-0.1
1,471,606	-				-0.6
1,472,070	+				-0.2
1,472,247	-				+0.5
1,472,247	-				-1.8
1,472,522	-	ydbC	b1406	0.32	+0.6
1,472,522	-	ydbC	b1406	0.32	-1.1
1,472,628	+	ydbC	b1406	0.44	+0.2
1,472,639	+	ydbC	b1406	0.46	-0.1
1,472,639	+	ydbC	b1406	0.46	+0.3
1,472,758	-	ydbC	b1406	0.60	-0.1
1,472,863	+	ydbC	b1406	0.72	+0.7
1,472,912	+	ydbC	b1406	0.77	+0.2
1,472,950	-	ydbC	b1406	0.82	+1.0
1,472,956	+	ydbC	b1406	0.83	+0.3
1,472,956	+	ydbC	b1406	0.83	+0.2
1,472,959	-	ydbC	b1406	0.83	+1.6
1,473,173	-				-1.3
1,473,178	-				+0.3
1,473,178	-				-0.3
1,473,178	-				+0.5
1,473,206	-				-1.1
1,473,219	-				+0.1
1,473,219	-				-0.6
1,473,219	-				+1.3
1,473,221	+				-0.3
1,473,221	+				+2.3
1,473,234	-				-0.2
1,473,243	-				+2.0
1,473,250	-				+1.3
1,473,324	+				-0.7
1,473,331	+				+1.4
1,473,337	+				-0.9
1,473,373	+				+0.6
1,473,407	+	ydbD	b1407	0.10	+1.3
1,473,989	+	ydbD	b1407	0.36	+1.0
1,474,097	-	ydbD	b1407	0.40	+2.0