Strain Fitness in Escherichia coli BW25113 around b3755

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
3,937,665	-	hsrA	b3754	0.32	-1.0
3,937,667	+	hsrA	b3754	0.32	+0.7
3,937,725	+	hsrA	b3754	0.36	-0.2
3,937,759	+	hsrA	b3754	0.39	+0.6
3,937,789	+	hsrA	b3754	0.41	+0.2
3,937,789	+	hsrA	b3754	0.41	-0.8
3,937,792	+	hsrA	b3754	0.41	-0.3
3,937,792	+	hsrA	b3754	0.41	-0.1
3,937,792	+	hsrA	b3754	0.41	+1.4
3,937,797	-	hsrA	b3754	0.41	+0.1
3,937,797	-	hsrA	b3754	0.41	+0.6
3,937,800	-	hsrA	b3754	0.41	-1.0
3,937,800	-	hsrA	b3754	0.41	+0.9
3,937,800	-	hsrA	b3754	0.41	+0.1
3,937,832	-	hsrA	b3754	0.44	+0.2
3,937,995	-	hsrA	b3754	0.55	-0.6
3,937,995	-	hsrA	b3754	0.55	+0.7
3,938,052	-	hsrA	b3754	0.59	-0.4
3,938,059	+	hsrA	b3754	0.60	+1.0
3,938,059	+	hsrA	b3754	0.60	-0.6
3,938,106	+	hsrA	b3754	0.63	+0.8
3,938,106	+	hsrA	b3754	0.63	-0.2
3,938,149	-	hsrA	b3754	0.66	-3.0
3,938,154	+	hsrA	b3754	0.66	-1.4
3,938,207	-	hsrA	b3754	0.70	+1.3
3,938,259	-	hsrA	b3754	0.74	+0.1
3,938,269	-	hsrA	b3754	0.74	+0.3
3,938,285	+	hsrA	b3754	0.75	-2.0
3,938,285	+	hsrA	b3754	0.75	+0.2
3,938,306	+	hsrA	b3754	0.77	+0.1
3,938,306	+	hsrA	b3754	0.77	-0.3
3,938,368	-	hsrA	b3754	0.81	-0.3
3,938,370	-	hsrA	b3754	0.81	-0.7
3,938,373	+	hsrA	b3754	0.82	-0.4
3,938,377	-	hsrA	b3754	0.82	+0.0
3,938,475	-	hsrA	b3754	0.89	+0.2
3,938,495	+				-1.3
3,938,505	-				+0.3
3,938,505	-				+0.5
3,938,509	+				+0.3
3,938,509	+				-0.2
3,938,563	-				+0.5
3,938,586	+				-0.5
3,938,597	+				-1.2
3,938,610	+				+0.2
3,938,610	+				+0.8
3,938,610	+				+0.3
3,938,628	-				+0.7
3,938,646	+				+0.1
3,938,646	+				+0.3
3,938,654	-				-0.5
3,938,657	+				-0.9
3,938,657	+				-0.3
3,938,666	-				-0.8
3,938,666	-				-0.1
3,938,668	+				+1.2
3,938,668	+				-1.2
3,938,673	+				+1.2
3,938,715	+				+1.5
3,938,753	-	yieP	b3755	0.14	+1.3
3,938,758	-	yieP	b3755	0.14	+1.9
3,938,765	-	yieP	b3755	0.15	+2.1
3,938,773	+	yieP	b3755	0.17	+2.1
3,938,819	-	yieP	b3755	0.23	+1.3
3,938,944	+	yieP	b3755	0.41	+0.7
3,938,944	+	yieP	b3755	0.41	+1.8
3,938,954	-	yieP	b3755	0.43	+1.5
3,938,979	-	yieP	b3755	0.46	+1.4
3,938,979	-	yieP	b3755	0.46	+2.0
3,939,037	-	yieP	b3755	0.55	+2.1
3,939,068	+	yieP	b3755	0.59	+1.9
3,939,072	-	yieP	b3755	0.60	-2.7
3,939,072	-	yieP	b3755	0.60	+2.2
3,939,190	-	yieP	b3755	0.77	+1.5
3,939,194	+	yieP	b3755	0.77	+1.5
3,939,390	+				-3.1
3,939,398	-				-0.1
3,939,400	+				-0.1
3,939,410	-				-0.5
3,939,410	-				-1.5