Strain Fitness in Escherichia coli BW25113 around b4158

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
4,382,727	+	yjeM	b4156	0.58	+0.4
4,382,727	+	yjeM	b4156	0.58	+0.7
4,382,727	+	yjeM	b4156	0.58	+0.2
4,382,727	+	yjeM	b4156	0.58	-0.4
4,382,728	+	yjeM	b4156	0.58	-0.5
4,382,733	+	yjeM	b4156	0.58	-1.6
4,382,733	+	yjeM	b4156	0.58	-1.7
4,382,735	-	yjeM	b4156	0.58	-3.3
4,382,735	-	yjeM	b4156	0.58	-0.4
4,382,735	-	yjeM	b4156	0.58	-3.9
4,382,735	-	yjeM	b4156	0.58	-2.5
4,382,736	-	yjeM	b4156	0.58	-0.4
4,382,736	-	yjeM	b4156	0.58	-2.2
4,382,738	+	yjeM	b4156	0.58	+0.1
4,382,738	+	yjeM	b4156	0.58	+1.1
4,382,741	-	yjeM	b4156	0.58	-2.5
4,382,741	-	yjeM	b4156	0.58	-0.7
4,382,743	+	yjeM	b4156	0.59	+0.8
4,382,746	-	yjeM	b4156	0.59	+0.1
4,382,746	-	yjeM	b4156	0.59	+0.7
4,382,746	-	yjeM	b4156	0.59	-3.2
4,382,746	-	yjeM	b4156	0.59	+1.0
4,382,746	-	yjeM	b4156	0.59	+0.7
4,382,746	-	yjeM	b4156	0.59	+1.0
4,382,746	-	yjeM	b4156	0.59	-0.2
4,382,746	-	yjeM	b4156	0.59	+0.8
4,382,746	-	yjeM	b4156	0.59	-0.7
4,382,746	-	yjeM	b4156	0.59	-0.9
4,382,746	-	yjeM	b4156	0.59	+0.7
4,382,747	-	yjeM	b4156	0.59	+0.1
4,382,748	-	yjeM	b4156	0.59	-0.2
4,382,750	+	yjeM	b4156	0.59	-0.8
4,382,750	+	yjeM	b4156	0.59	+1.9
4,382,751	-	yjeM	b4156	0.59	+0.7
4,382,751	-	yjeM	b4156	0.59	-0.2
4,382,751	-	yjeM	b4156	0.59	+1.3
4,382,751	-	yjeM	b4156	0.59	+0.9
4,382,753	-	yjeM	b4156	0.59	-0.0
4,382,756	-	yjeM	b4156	0.59	-1.2
4,382,756	-	yjeM	b4156	0.59	-0.3
4,382,782	-	yjeM	b4156	0.61	-0.1
4,382,782	-	yjeM	b4156	0.61	+0.2
4,382,788	+	yjeM	b4156	0.62	-0.8
4,382,788	+	yjeM	b4156	0.62	-0.6
4,382,794	-	yjeM	b4156	0.62	-2.4
4,382,795	-	yjeM	b4156	0.62	-0.7
4,382,802	-	yjeM	b4156	0.63	+0.7
4,382,827	+	yjeM	b4156	0.64	+0.6
4,382,827	+	yjeM	b4156	0.64	-0.6
4,382,827	+	yjeM	b4156	0.64	+2.2
4,382,835	-	yjeM	b4156	0.65	-1.0
4,382,835	-	yjeM	b4156	0.65	+0.2
4,382,835	-	yjeM	b4156	0.65	-0.3
4,382,835	-	yjeM	b4156	0.65	+0.5
4,382,842	-	yjeM	b4156	0.65	+0.6
4,382,842	-	yjeM	b4156	0.65	-0.1
4,382,871	+	yjeM	b4156	0.67	+0.4
4,382,887	-	yjeM	b4156	0.68	-0.1
4,382,973	-	yjeM	b4156	0.74	+0.1
4,383,015	-	yjeM	b4156	0.77	-0.2
4,383,058	+	yjeM	b4156	0.80	-0.7
4,383,058	+	yjeM	b4156	0.80	+0.5
4,383,123	+	yjeM	b4156	0.84	+0.7
4,383,123	+	yjeM	b4156	0.84	+0.3
4,383,166	+	yjeM	b4156	0.87	-0.4
4,383,219	+				+0.1
4,383,226	+				-0.7
4,383,330	-				-0.3
4,383,377	+				+0.6
4,383,377	+				+0.6
4,383,384	-				-0.2
4,383,403	-				-0.2
4,383,403	-				-1.7
4,383,403	-				-0.2
4,383,423	+				+0.1
4,383,502	+	yjeN	b4157	0.27	+1.5
4,383,502	+	yjeN	b4157	0.27	+0.1
4,383,503	-	yjeN	b4157	0.28	+0.5
4,383,567	-	yjeN	b4157	0.48	+0.8
4,383,570	+	yjeN	b4157	0.49	-0.7
4,383,582	+	yjeN	b4157	0.53	+0.2
4,383,622	+	yjeN	b4157	0.65	+0.4
4,383,635	-	yjeN	b4157	0.70	+0.2
4,383,727	-				-1.2
4,383,731	-				+0.7
4,383,731	-				+0.4
4,383,748	-				+0.4
4,383,853	+	yjeO	b4158	0.40	-0.2
4,383,853	+	yjeO	b4158	0.40	+0.9
4,383,858	+	yjeO	b4158	0.42	+1.2
4,383,913	+	yjeO	b4158	0.59	+0.5
4,384,045	+				+0.2
4,384,140	-				-1.0
4,384,151	+				+0.6
4,384,197	-				+0.4
4,384,197	-				-0.0
4,384,221	+				-0.2
4,384,251	-				-0.1
4,384,251	-				+1.1
4,384,257	-				-2.0
4,384,257	-				-0.3
4,384,268	-				+1.2
4,384,339	-				+0.6
4,384,364	-				+0.1
4,384,403	+	yjeP	b4159	0.10	-0.9
4,384,403	+	yjeP	b4159	0.10	-0.0
4,384,412	+	yjeP	b4159	0.10	-0.8
4,384,412	+	yjeP	b4159	0.10	-1.1
4,384,412	+	yjeP	b4159	0.10	+1.9
4,384,412	+	yjeP	b4159	0.10	+1.5
4,384,412	+	yjeP	b4159	0.10	+0.5
4,384,426	-	yjeP	b4159	0.11	-0.4
4,384,434	+	yjeP	b4159	0.11	+0.1
4,384,434	+	yjeP	b4159	0.11	-2.2
4,384,513	+	yjeP	b4159	0.13	+0.8
4,384,553	+	yjeP	b4159	0.15	+0.4
4,384,553	+	yjeP	b4159	0.15	-2.0
4,384,609	+	yjeP	b4159	0.16	-0.8
4,384,609	+	yjeP	b4159	0.16	+0.7
4,384,651	+	yjeP	b4159	0.17	-0.3
4,384,671	-	yjeP	b4159	0.18	-0.1
4,384,689	-	yjeP	b4159	0.19	-0.7
4,384,710	+	yjeP	b4159	0.19	+0.5
4,384,714	-	yjeP	b4159	0.19	+0.8
4,384,714	-	yjeP	b4159	0.19	-0.4
4,384,718	-	yjeP	b4159	0.19	+0.2
4,384,718	-	yjeP	b4159	0.19	-1.2
4,384,773	+	yjeP	b4159	0.21	+0.5
4,384,773	+	yjeP	b4159	0.21	+0.5
4,384,779	+	yjeP	b4159	0.21	-0.0
4,384,781	-	yjeP	b4159	0.21	-0.6
4,384,793	-	yjeP	b4159	0.22	+0.5
4,384,793	-	yjeP	b4159	0.22	+0.5
4,384,826	+	yjeP	b4159	0.23	+0.0
4,384,832	-	yjeP	b4159	0.23	+0.1
4,384,855	+	yjeP	b4159	0.24	+0.5
4,384,886	+	yjeP	b4159	0.25	+0.4
4,384,913	-	yjeP	b4159	0.25	-2.0
4,384,913	-	yjeP	b4159	0.25	+0.5
4,384,928	+	yjeP	b4159	0.26	-0.5
4,384,928	+	yjeP	b4159	0.26	+0.1
4,384,933	+	yjeP	b4159	0.26	-2.5
4,384,936	-	yjeP	b4159	0.26	+0.5
4,384,936	-	yjeP	b4159	0.26	+0.1
4,384,936	-	yjeP	b4159	0.26	-0.4