Strain Fitness in Escherichia coli BW25113 around b3260

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
3,407,338	-	prmA	b3259	0.28	+1.1
3,407,338	-	prmA	b3259	0.28	-0.8
3,407,514	+	prmA	b3259	0.48	-0.8
3,407,641	-	prmA	b3259	0.62	-0.6
3,407,812	+	prmA	b3259	0.82	+0.5
3,407,877	+	prmA	b3259	0.89	+0.9
3,407,909	+				+0.5
3,407,914	+				+0.3
3,407,914	+				-0.7
3,407,917	-				-0.8
3,408,312	+				+0.9
3,408,357	+				-1.6
3,408,357	+				+0.7
3,408,364	+				+0.6
3,408,413	+	dusB	b3260	0.11	-0.3
3,408,413	+	dusB	b3260	0.11	+1.5
3,408,481	+	dusB	b3260	0.19	-1.1
3,408,506	+	dusB	b3260	0.21	+0.3
3,408,559	-	dusB	b3260	0.27	-0.7
3,408,560	-	dusB	b3260	0.27	+0.2
3,408,668	-	dusB	b3260	0.38	+1.4
3,408,772	-	dusB	b3260	0.49	+2.2
3,408,773	+	dusB	b3260	0.49	+0.5
3,408,842	+	dusB	b3260	0.56	+1.6
3,408,842	+	dusB	b3260	0.56	-0.6
3,408,847	+	dusB	b3260	0.56	+0.6
3,408,847	+	dusB	b3260	0.56	-1.1
3,408,909	-	dusB	b3260	0.63	+1.8
3,408,912	-	dusB	b3260	0.63	+1.2
3,408,942	+	dusB	b3260	0.66	+1.3
3,408,943	-	dusB	b3260	0.66	+1.1
3,408,943	-	dusB	b3260	0.66	-2.2
3,408,945	+	dusB	b3260	0.67	-0.2
3,408,945	+	dusB	b3260	0.67	+0.7
3,408,952	+	dusB	b3260	0.67	-0.4
3,408,953	-	dusB	b3260	0.67	+0.0
3,408,961	+	dusB	b3260	0.68	+0.1
3,408,988	-	dusB	b3260	0.71	+1.2
3,408,991	+	dusB	b3260	0.71	+1.9
3,409,134	-	dusB	b3260	0.86	+1.6
3,409,431	+	fis	b3261	0.46	+1.1
3,409,435	-	fis	b3261	0.48	+2.2
3,409,442	+	fis	b3261	0.50	-0.5
3,409,446	-	fis	b3261	0.52	-1.1
3,409,447	+	fis	b3261	0.52	-1.0
3,409,450	-	fis	b3261	0.53	+2.1
3,409,464	+	fis	b3261	0.58	+0.8
3,409,478	+	fis	b3261	0.62	+2.2
3,409,493	+	fis	b3261	0.67	-1.6
3,409,493	+	fis	b3261	0.67	-1.0
3,409,514	+	fis	b3261	0.74	+2.2
3,409,524	+	fis	b3261	0.78	-0.4
3,409,524	+	fis	b3261	0.78	+0.6
3,409,733	+				-0.4
3,409,828	-	yhdJ	b3262	0.17	+0.2
3,409,873	-	yhdJ	b3262	0.22	+0.7
3,409,879	+	yhdJ	b3262	0.23	+0.3
3,409,879	+	yhdJ	b3262	0.23	+0.6
3,409,895	-	yhdJ	b3262	0.25	+0.5
3,409,915	+	yhdJ	b3262	0.27	-0.6
3,409,968	+	yhdJ	b3262	0.33	+0.3
3,410,048	-	yhdJ	b3262	0.42	-0.3
3,410,097	+	yhdJ	b3262	0.48	+1.0
3,410,108	+	yhdJ	b3262	0.49	+0.9
3,410,168	+	yhdJ	b3262	0.56	+0.0
3,410,186	-	yhdJ	b3262	0.58	-3.3
3,410,186	-	yhdJ	b3262	0.58	+0.5