Strain Fitness in Escherichia coli BW25113 around b1243

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
1,298,207	-	ychE	b1242	0.60	-1.6
1,298,242	-	ychE	b1242	0.65	+0.4
1,298,242	-	ychE	b1242	0.65	+0.7
1,298,286	-	ychE	b1242	0.72	+0.1
1,298,300	+	ychE	b1242	0.74	-1.2
1,298,334	-	ychE	b1242	0.79	+2.0
1,298,383	+	ychE	b1242	0.87	+0.0
1,298,706	-				-1.6
1,298,706	-				+0.7
1,298,778	+				+0.3
1,298,778	+				-0.8
1,298,844	+				+0.2
1,298,852	+				-0.4
1,298,937	-				-1.2
1,299,060	+				+0.1
1,299,129	+				+0.0
1,299,130	-				-0.4
1,299,130	-				+1.4
1,299,134	+				-2.7
1,299,139	-				+0.8
1,299,142	-				+1.0
1,299,172	+				-0.2
1,299,290	+				-0.8
1,299,549	+	oppA	b1243	0.21	+0.8
1,299,551	+	oppA	b1243	0.21	-0.1
1,299,891	+	oppA	b1243	0.42	+1.0
1,299,901	+	oppA	b1243	0.43	+1.2
1,299,901	+	oppA	b1243	0.43	-0.1
1,300,021	+	oppA	b1243	0.50	-0.3
1,300,152	+	oppA	b1243	0.58	+0.8
1,300,240	+	oppA	b1243	0.63	+0.4
1,300,243	-	oppA	b1243	0.64	-0.4
1,300,270	+	oppA	b1243	0.65	+0.7
1,300,530	+	oppA	b1243	0.81	+2.3
1,300,601	+	oppA	b1243	0.85	+0.6
1,300,601	+	oppA	b1243	0.85	+0.5
1,300,743	-				+1.2
1,300,801	+				+0.3
1,300,801	+				-0.7
1,300,894	+				-0.8
1,300,899	+				+0.0
1,300,899	+				-3.0
1,301,103	+	oppB	b1244	0.20	-0.4
1,301,303	+	oppB	b1244	0.41	-1.5
1,301,303	+	oppB	b1244	0.41	-1.0
1,301,303	+	oppB	b1244	0.41	+0.6
1,301,310	+	oppB	b1244	0.42	+0.3
1,301,311	-	oppB	b1244	0.42	+1.1
1,301,319	+	oppB	b1244	0.43	-1.0
1,301,322	-	oppB	b1244	0.43	+3.2
1,301,324	+	oppB	b1244	0.44	-3.2
1,301,324	+	oppB	b1244	0.44	-0.5
1,301,343	-	oppB	b1244	0.46	+0.9
1,301,581	+	oppB	b1244	0.71	-0.8
1,301,593	+	oppB	b1244	0.73	+0.3
1,301,631	-	oppB	b1244	0.77	-1.2
1,301,650	+	oppB	b1244	0.79	+0.4
1,301,735	+	oppB	b1244	0.88	+0.5
1,301,745	+	oppB	b1244	0.89	+0.8
1,301,745	+	oppB	b1244	0.89	+0.5
1,301,759	-				+1.4