Strain Fitness in Escherichia coli BW25113 around b4245

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
4,468,519	-				+0.7
4,468,521	+				-1.3
4,468,521	+				+1.1
4,468,598	-	yjgF	b4243	0.12	-2.3
4,468,615	+	yjgF	b4243	0.17	+0.4
4,468,615	+	yjgF	b4243	0.17	-0.1
4,468,622	-	yjgF	b4243	0.19	-1.0
4,468,648	+	yjgF	b4243	0.25	+0.7
4,468,658	-				-0.3
4,468,673	+	yjgF	b4243	0.32	-0.1
4,468,743	-	yjgF	b4243	0.50	+0.0
4,468,743	-	yjgF	b4243	0.50	+0.2
4,468,743	-	yjgF	b4243	0.50	+0.1
4,468,744	-	yjgF	b4243	0.50	+0.6
4,468,744	-	yjgF	b4243	0.50	-0.3
4,468,749	+	yjgF	b4243	0.51	-0.5
4,468,757	-	yjgF	b4243	0.53	-0.1
4,468,757	-	yjgF	b4243	0.53	-0.5
4,468,860	+	yjgF	b4243	0.80	-2.4
4,468,890	-	yjgF	b4243	0.88	+0.2
4,468,890	-	yjgF	b4243	0.88	+0.3
4,468,898	-				-0.6
4,468,899	-				-3.1
4,469,025	+				-2.7
4,469,025	+				-3.4
4,469,059	-	pyrI	b4244	0.11	-0.7
4,469,059	-	pyrI	b4244	0.11	-0.1
4,469,121	-	pyrI	b4244	0.24	-0.3
4,469,140	-	pyrI	b4244	0.28	+0.5
4,469,155	-	pyrI	b4244	0.32	-0.8
4,469,157	+	pyrI	b4244	0.32	+0.4
4,469,165	-	pyrI	b4244	0.34	+0.1
4,469,179	-	pyrI	b4244	0.37	-0.9
4,469,179	-	pyrI	b4244	0.37	-0.6
4,469,186	+	pyrI	b4244	0.38	+0.4
4,469,199	+	pyrI	b4244	0.41	-0.9
4,469,204	+	pyrI	b4244	0.42	+0.0
4,469,208	-	pyrI	b4244	0.43	+0.1
4,469,218	+	pyrI	b4244	0.45	-0.6
4,469,245	+	pyrI	b4244	0.51	-2.0
4,469,245	+	pyrI	b4244	0.51	+0.9
4,469,348	-	pyrI	b4244	0.73	-0.3
4,469,366	-	pyrI	b4244	0.77	+0.1
4,469,379	-	pyrI	b4244	0.80	-0.1
4,469,379	-	pyrI	b4244	0.80	+0.2
4,469,414	+	pyrI	b4244	0.88	+0.2
4,469,422	-	pyrI	b4244	0.89	-0.0
4,469,442	-				-0.1
4,469,501	+				-0.4
4,469,560	-				+0.0
4,469,562	+				+1.4
4,469,579	+	pyrB	b4245	0.10	+1.5
4,469,579	+	pyrB	b4245	0.10	+0.5
4,469,648	+	pyrB	b4245	0.18	+0.4
4,469,715	-	pyrB	b4245	0.25	+0.4
4,469,744	-	pyrB	b4245	0.28	+0.4
4,469,746	-	pyrB	b4245	0.28	+0.1
4,469,751	+	pyrB	b4245	0.29	+0.1
4,469,777	+	pyrB	b4245	0.31	+1.0
4,469,780	+	pyrB	b4245	0.32	+0.8
4,469,780	+	pyrB	b4245	0.32	+0.7
4,469,787	+	pyrB	b4245	0.32	+0.1
4,469,793	-	pyrB	b4245	0.33	+0.7
4,469,793	-	pyrB	b4245	0.33	+0.4
4,469,817	+	pyrB	b4245	0.36	+0.1
4,469,937	-	pyrB	b4245	0.49	+0.5
4,469,945	+	pyrB	b4245	0.49	+0.7
4,469,952	+	pyrB	b4245	0.50	-0.2
4,469,966	+	pyrB	b4245	0.52	+1.1
4,470,043	+	pyrB	b4245	0.60	+0.5
4,470,104	+	pyrB	b4245	0.66	+0.4
4,470,104	+	pyrB	b4245	0.66	+0.5
4,470,106	+	pyrB	b4245	0.67	+0.9
4,470,200	+	pyrB	b4245	0.77	+0.6
4,470,224	+	pyrB	b4245	0.79	+0.2
4,470,257	+	pyrB	b4245	0.83	-0.2
4,470,359	-				+0.7
4,470,427	-				+0.3
4,470,427	-				+1.7
4,470,466	+	pyrL	b4246	0.33	+0.3
4,470,466	+	pyrL	b4246	0.33	+0.2
4,470,482	-	pyrL	b4246	0.44	+1.5
4,470,718	+				-2.2
4,470,764	+				+0.2
4,470,783	-				+0.3
4,470,783	-				+0.4
4,470,796	+				+0.6
4,470,796	+				-1.3
4,470,808	+				-0.1
4,470,830	+				-1.9
4,470,830	-				-0.5
4,470,830	-				+2.2
4,470,840	+				+0.5
4,470,842	+				+0.4
4,470,842	+				-0.7
4,470,842	-				+0.5
4,470,898	-	yjgH	b4248	0.15	+0.3
4,470,899	-	yjgH	b4248	0.16	-0.2
4,470,988	+	yjgH	b4248	0.38	+0.7
4,470,996	-	yjgH	b4248	0.40	+0.1
4,470,996	-	yjgH	b4248	0.40	-0.5
4,470,996	-	yjgH	b4248	0.40	+0.7
4,471,004	-	yjgH	b4248	0.42	-1.0
4,471,009	-	yjgH	b4248	0.43	-1.9
4,471,012	-	yjgH	b4248	0.44	-0.3
4,471,097	+	yjgH	b4248	0.66	+0.4
4,471,176	-	yjgH	b4248	0.86	-0.9
4,471,354	-				+0.0
4,471,362	+				+2.8
4,471,367	+				-2.3
4,471,378	-				-0.6
4,471,388	-				+0.9
4,471,388	-				-0.5