Strain Fitness in Escherichia coli BW25113 around b3934

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
4,120,456	+				+0.6
4,120,456	-				+1.0
4,120,464	-				+0.9
4,120,518	+	ftsN	b3933	0.12	-0.0
4,120,518	+	ftsN	b3933	0.12	+1.3
4,120,564	-	ftsN	b3933	0.17	+0.8
4,120,564	-	ftsN	b3933	0.17	+0.5
4,120,569	-	ftsN	b3933	0.17	-0.1
4,120,575	+	ftsN	b3933	0.18	-0.4
4,120,575	+	ftsN	b3933	0.18	+0.6
4,120,578	-	ftsN	b3933	0.18	+0.0
4,120,601	-	ftsN	b3933	0.21	+0.6
4,120,601	-	ftsN	b3933	0.21	-0.9
4,120,601	-	ftsN	b3933	0.21	+0.3
4,120,607	+	ftsN	b3933	0.21	+0.0
4,120,607	+	ftsN	b3933	0.21	+0.1
4,120,607	+	ftsN	b3933	0.21	+0.0
4,120,615	-	ftsN	b3933	0.22	+0.8
4,120,615	-	ftsN	b3933	0.22	+0.7
4,120,615	-	ftsN	b3933	0.22	+1.1
4,120,651	+	ftsN	b3933	0.26	-0.9
4,120,653	-	ftsN	b3933	0.26	+1.1
4,120,653	-	ftsN	b3933	0.26	+0.8
4,120,670	-	ftsN	b3933	0.28	+0.8
4,120,670	-	ftsN	b3933	0.28	+0.3
4,120,681	+	ftsN	b3933	0.29	-0.3
4,120,695	+	ftsN	b3933	0.30	-1.2
4,120,695	+	ftsN	b3933	0.30	+0.7
4,120,715	-	ftsN	b3933	0.33	+0.9
4,120,740	+	ftsN	b3933	0.35	+1.3
4,120,740	+	ftsN	b3933	0.35	+1.2
4,120,763	-	ftsN	b3933	0.38	+1.8
4,120,765	+	ftsN	b3933	0.38	+1.5
4,120,767	+	ftsN	b3933	0.38	+0.2
4,120,773	-	ftsN	b3933	0.39	-0.6
4,120,784	+	ftsN	b3933	0.40	-1.9
4,120,786	+	ftsN	b3933	0.40	-1.8
4,120,786	+	ftsN	b3933	0.40	+2.8
4,120,787	-	ftsN	b3933	0.40	-0.3
4,120,845	+	ftsN	b3933	0.46	-0.5
4,120,855	+	ftsN	b3933	0.47	+1.1
4,120,858	-	ftsN	b3933	0.47	+0.4
4,120,865	+	ftsN	b3933	0.48	+1.1
4,120,899	-	ftsN	b3933	0.52	-0.6
4,120,899	-	ftsN	b3933	0.52	+0.2
4,120,919	+	ftsN	b3933	0.54	+0.3
4,120,929	-	ftsN	b3933	0.55	+0.7
4,120,929	-	ftsN	b3933	0.55	+0.7
4,121,001	-	ftsN	b3933	0.62	+0.6
4,121,001	-	ftsN	b3933	0.62	+0.2
4,121,375	+				+0.4
4,121,375	+				-1.7
4,121,428	+				-0.6
4,121,436	-				+0.3
4,121,436	-				+0.7
4,121,436	-				+1.5
4,121,452	+				+0.9
4,121,460	-				-0.0
4,121,483	-				+0.3
4,121,499	-				+0.4
4,121,512	-				-1.0
4,121,512	-				+0.2
4,121,517	+				+0.9
4,121,517	+				+0.5
4,121,530	+				+0.7
4,121,530	-				-0.2
4,121,531	-				+0.5
4,121,553	-				+0.2
4,121,553	-				+0.2
4,121,558	-	cytR	b3934	0.10	+1.5
4,121,603	-	cytR	b3934	0.15	+0.6
4,121,714	+	cytR	b3934	0.25	+2.5
4,121,714	+	cytR	b3934	0.25	-1.6
4,121,818	-	cytR	b3934	0.35	+1.1
4,121,818	-	cytR	b3934	0.35	+1.3
4,121,827	-	cytR	b3934	0.36	-0.2
4,121,847	+	cytR	b3934	0.38	+1.0
4,121,847	+	cytR	b3934	0.38	+1.3
4,121,852	+	cytR	b3934	0.39	+0.6
4,121,858	+	cytR	b3934	0.39	+0.1
4,121,895	+	cytR	b3934	0.43	+0.5
4,121,895	+	cytR	b3934	0.43	-0.1
4,121,905	-	cytR	b3934	0.44	+1.4
4,121,906	+	cytR	b3934	0.44	+1.6
4,121,914	-	cytR	b3934	0.45	+0.8
4,121,923	+	cytR	b3934	0.46	+1.7
4,121,970	+	cytR	b3934	0.50	+0.4
4,121,982	+	cytR	b3934	0.51	+0.8
4,121,987	+	cytR	b3934	0.52	+1.1
4,121,989	+	cytR	b3934	0.52	+0.4
4,121,990	-	cytR	b3934	0.52	+1.0
4,121,990	-	cytR	b3934	0.52	+1.7
4,122,053	-	cytR	b3934	0.58	+0.7
4,122,053	-	cytR	b3934	0.58	+0.8
4,122,088	-	cytR	b3934	0.62	+0.9
4,122,098	-	cytR	b3934	0.63	-1.7
4,122,104	-	cytR	b3934	0.63	+0.2
4,122,121	-	cytR	b3934	0.65	+1.1
4,122,185	-	cytR	b3934	0.71	+0.6
4,122,190	-	cytR	b3934	0.72	+1.4
4,122,190	-	cytR	b3934	0.72	+0.6
4,122,203	+	cytR	b3934	0.73	+0.3
4,122,247	+	cytR	b3934	0.77	+0.5
4,122,259	+	cytR	b3934	0.78	+0.0
4,122,277	-	cytR	b3934	0.80	+0.1
4,122,277	-	cytR	b3934	0.80	+0.0
4,122,312	-	cytR	b3934	0.84	+1.1
4,122,353	+	cytR	b3934	0.88	+0.8
4,122,353	+	cytR	b3934	0.88	+0.7
4,122,361	-	cytR	b3934	0.88	+1.5
4,122,364	+	cytR	b3934	0.89	+0.9
4,122,387	+				+0.5
4,122,395	-				+0.6
4,122,499	+				+0.4
4,122,502	+				+0.6
4,122,647	-				-0.8