Strain Fitness in Escherichia coli BW25113 around b3602

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
3,773,688	+	mtlR	b3601	0.16	+1.0
3,773,688	+	mtlR	b3601	0.16	-0.0
3,773,697	+	mtlR	b3601	0.17	+0.5
3,773,718	-	mtlR	b3601	0.21	-0.6
3,773,718	-	mtlR	b3601	0.21	+0.4
3,773,810	+	mtlR	b3601	0.37	+0.6
3,773,816	-	mtlR	b3601	0.38	+0.7
3,773,818	+	mtlR	b3601	0.38	+0.2
3,773,828	-	mtlR	b3601	0.40	-0.6
3,773,828	-	mtlR	b3601	0.40	+0.5
3,773,829	+	mtlR	b3601	0.40	-0.1
3,773,857	+	mtlR	b3601	0.45	-1.7
3,773,857	+	mtlR	b3601	0.45	+0.5
3,773,928	-	mtlR	b3601	0.57	+0.1
3,773,928	-	mtlR	b3601	0.57	+0.4
3,774,003	-	mtlR	b3601	0.69	+0.2
3,774,003	-	mtlR	b3601	0.69	+0.1
3,774,007	+	mtlR	b3601	0.70	-0.3
3,774,007	+	mtlR	b3601	0.70	+0.8
3,774,012	+	mtlR	b3601	0.71	-0.3
3,774,028	-	mtlR	b3601	0.74	+0.9
3,774,028	-	mtlR	b3601	0.74	+0.7
3,774,113	-	mtlR	b3601	0.88	-1.3
3,774,123	+	mtlR	b3601	0.90	+0.2
3,774,192	+				+0.3
3,774,192	+				+0.0
3,774,197	+				+0.1
3,774,197	+				-0.6
3,774,201	+				+1.2
3,774,201	+				-0.4
3,774,201	+				+0.3
3,774,201	+				-0.2
3,774,233	+	yibT	b4554	0.19	-0.7
3,774,233	+	yibT	b4554	0.19	+0.7
3,774,255	-	yibT	b4554	0.29	-0.8
3,774,258	-	yibT	b4554	0.30	-0.3
3,774,258	-	yibT	b4554	0.30	+0.6
3,774,287	-	yibT	b4554	0.44	+1.9
3,774,292	-	yibT	b4554	0.47	-0.6
3,774,331	-	yibT	b4554	0.65	-0.9
3,774,331	-	yibT	b4554	0.65	-2.6
3,774,331	-	yibT	b4554	0.65	-1.7
3,774,331	-	yibT	b4554	0.65	-0.2
3,774,419	-				+0.4
3,774,424	-				+0.0
3,774,476	-				-0.9
3,774,490	-				-3.0
3,774,604	-				+0.5
3,774,622	-				+1.5
3,774,629	+				+1.2
3,774,629	+				-0.3
3,774,651	-				+0.1
3,774,651	-				+0.2
3,774,656	-				+1.4
3,774,656	-				+0.3
3,774,657	-				+0.2
3,774,732	+	yibL	b3602	0.12	+0.7
3,774,738	-	yibL	b3602	0.14	-0.5
3,774,738	-	yibL	b3602	0.14	-0.1
3,774,781	+	yibL	b3602	0.26	+0.6
3,774,858	-	yibL	b3602	0.47	-0.1
3,774,867	+	yibL	b3602	0.49	+0.3
3,774,898	+	yibL	b3602	0.58	+0.6
3,774,898	+	yibL	b3602	0.58	+0.9
3,774,938	-	yibL	b3602	0.69	+0.8
3,774,938	-	yibL	b3602	0.69	+0.2
3,774,944	+	yibL	b3602	0.71	+0.4
3,774,944	+	yibL	b3602	0.71	+0.5
3,774,973	+	yibL	b3602	0.79	+0.1
3,774,994	-	yibL	b3602	0.84	+1.3
3,775,062	+				-0.4
3,775,062	+				+0.5
3,775,125	-				-0.2
3,775,125	-				-0.1
3,775,130	-				-0.5
3,775,130	-				-0.4
3,775,156	+				-1.3
3,775,156	+				+1.1
3,775,183	+				-0.8
3,775,209	-				-0.1
3,775,303	-				-0.1
3,775,355	-				-1.0
3,775,355	-				+0.3
3,775,369	-				+0.4
3,775,369	-				+1.0
3,775,412	-				+0.7
3,775,412	-				+1.6
3,775,414	-				+0.6
3,775,726	-	lldP	b3603	0.18	+0.2
3,775,726	-	lldP	b3603	0.18	+0.0
3,775,743	-	lldP	b3603	0.19	+0.0
3,775,805	+	lldP	b3603	0.23	-0.8
3,775,805	+	lldP	b3603	0.23	-0.9
3,775,905	+	lldP	b3603	0.29	-0.3
3,775,913	-	lldP	b3603	0.30	+0.5
3,775,913	-	lldP	b3603	0.30	+0.2
3,775,967	+	lldP	b3603	0.33	-0.3
3,775,980	-	lldP	b3603	0.34	-1.4
3,775,980	-	lldP	b3603	0.34	+0.4
3,776,042	+	lldP	b3603	0.37	+0.7
3,776,050	-	lldP	b3603	0.38	+0.6