Strain Fitness in Escherichia coli BW25113 around b2576

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
2,709,919	+				+0.3
2,709,942	-				+0.5
2,709,942	-				-1.1
2,709,949	+				+0.2
2,709,954	+				-0.4
2,709,957	-				+2.0
2,709,997	+				-0.0
2,710,005	-				-0.7
2,710,005	-				+0.4
2,710,005	-				-0.0
2,710,189	-	yfiC	b2575	0.19	-0.4
2,710,236	+	yfiC	b2575	0.25	-0.2
2,710,329	+	yfiC	b2575	0.38	+0.1
2,710,375	-	yfiC	b2575	0.44	+0.1
2,710,398	+	yfiC	b2575	0.47	-0.1
2,710,399	-	yfiC	b2575	0.47	-0.7
2,710,399	-	yfiC	b2575	0.47	-1.0
2,710,402	-	yfiC	b2575	0.48	+0.3
2,710,409	+	yfiC	b2575	0.49	+0.7
2,710,410	+	yfiC	b2575	0.49	-0.5
2,710,413	-	yfiC	b2575	0.49	+1.1
2,710,413	-	yfiC	b2575	0.49	-0.3
2,710,418	-	yfiC	b2575	0.50	+0.3
2,710,418	-	yfiC	b2575	0.50	-1.1
2,710,439	-	yfiC	b2575	0.53	+0.4
2,710,439	-	yfiC	b2575	0.53	+1.0
2,710,591	-	yfiC	b2575	0.73	+0.1
2,710,770	+				-0.3
2,710,770	+				+0.0
2,710,770	+				+1.2
2,710,770	+				+0.3
2,710,778	-				-0.2
2,710,778	-				-2.2
2,710,833	-				-0.6
2,710,833	-				+0.4
2,710,838	+				-0.1
2,711,086	+	srmB	b2576	0.13	+1.3
2,711,159	+	srmB	b2576	0.18	-0.2
2,711,181	+	srmB	b2576	0.20	-1.2
2,711,268	-	srmB	b2576	0.26	-1.5
2,711,305	+	srmB	b2576	0.29	+1.3
2,711,376	-	srmB	b2576	0.34	-0.4
2,711,425	-	srmB	b2576	0.38	+0.2
2,711,557	-	srmB	b2576	0.48	+0.8
2,711,666	+	srmB	b2576	0.56	-2.0
2,711,698	+	srmB	b2576	0.58	-2.5
2,711,747	+				+0.3
2,711,849	+	srmB	b2576	0.70	-1.7
2,711,857	-	srmB	b2576	0.70	+2.2
2,711,857	-	srmB	b2576	0.70	+2.0
2,711,927	+	srmB	b2576	0.76	-1.5
2,712,112	-	srmB	b2576	0.89	+0.3
2,712,203	+				-0.2
2,712,218	+				-0.1
2,712,226	-				-1.4
2,712,489	-				+1.3
2,712,491	-				-0.1
2,712,491	-				+0.4
2,712,491	-				+0.7
2,712,533	-				+0.1
2,712,558	-	yfiE	b2577	0.11	+0.2
2,712,620	+	yfiE	b2577	0.18	-0.1
2,712,620	+	yfiE	b2577	0.18	+1.1
2,712,653	-	yfiE	b2577	0.22	-0.4
2,712,653	-	yfiE	b2577	0.22	-0.1
2,712,745	-	yfiE	b2577	0.32	+1.4
2,712,948	-	yfiE	b2577	0.55	+0.8
2,713,040	-	yfiE	b2577	0.66	+0.3
2,713,074	-	yfiE	b2577	0.70	-0.1