Strain Fitness in Escherichia coli BW25113 around b2375

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
2,490,873	-	frc	b2374	0.68	-3.5
2,490,875	-	frc	b2374	0.68	-1.4
2,490,875	-	frc	b2374	0.68	+0.6
2,490,953	+	frc	b2374	0.74	+0.6
2,490,961	-	frc	b2374	0.75	+0.9
2,490,962	+	frc	b2374	0.75	-0.2
2,490,967	+	frc	b2374	0.75	-2.4
2,490,976	+	frc	b2374	0.76	-2.7
2,490,976	+	frc	b2374	0.76	-0.5
2,491,026	+	frc	b2374	0.80	-0.5
2,491,026	+	frc	b2374	0.80	+1.5
2,491,034	+	frc	b2374	0.81	-0.5
2,491,034	+	frc	b2374	0.81	-0.9
2,491,082	+	frc	b2374	0.84	-1.8
2,491,085	+	frc	b2374	0.85	-0.9
2,491,093	-	frc	b2374	0.85	+0.9
2,491,100	+	frc	b2374	0.86	+0.9
2,491,100	+	frc	b2374	0.86	+0.9
2,491,100	+	frc	b2374	0.86	-0.0
2,491,124	+	frc	b2374	0.88	+0.7
2,491,135	+	frc	b2374	0.89	-1.1
2,491,135	+	frc	b2374	0.89	-0.1
2,491,144	+	frc	b2374	0.89	-0.1
2,491,147	+	frc	b2374	0.90	-0.8
2,491,148	+	frc	b2374	0.90	+0.5
2,491,158	-				+1.2
2,491,163	-				-1.9
2,491,180	+				+2.5
2,491,214	+				-0.9
2,491,214	+				-0.8
2,491,223	+				-0.4
2,491,223	+				+0.9
2,491,225	+				+2.8
2,491,225	+				+2.5
2,491,751	-				+0.9
2,491,751	-				-0.3
2,491,778	-				+2.2
2,491,778	-				-1.6
2,491,801	-				+0.3
2,491,821	-				-3.2
2,491,821	-				-0.6
2,491,905	+	yfdX	b2375	0.18	+1.5
2,491,911	-	yfdX	b2375	0.19	-1.3
2,491,925	-	yfdX	b2375	0.21	+2.5
2,491,950	+	yfdX	b2375	0.25	+2.5
2,491,956	-	yfdX	b2375	0.26	-1.2
2,492,060	-	yfdX	b2375	0.43	+1.5
2,492,060	-	yfdX	b2375	0.43	+0.5
2,492,062	-	yfdX	b2375	0.43	+2.5
2,492,102	-	yfdX	b2375	0.49	-0.7
2,492,137	-	yfdX	b2375	0.55	-1.0
2,492,153	+	yfdX	b2375	0.57	+0.5
2,492,153	+	yfdX	b2375	0.57	+0.9
2,492,159	-	yfdX	b2375	0.58	-0.4
2,492,161	-	yfdX	b2375	0.58	+0.5
2,492,183	+	yfdX	b2375	0.62	+0.5
2,492,183	+	yfdX	b2375	0.62	+0.2
2,492,221	+	yfdX	b2375	0.68	-0.1
2,492,221	+	yfdX	b2375	0.68	-0.8
2,492,227	+	yfdX	b2375	0.69	+1.5
2,492,232	+	yfdX	b2375	0.70	-2.7
2,492,269	-	yfdX	b2375	0.75	-1.1
2,492,284	-	yfdX	b2375	0.78	-2.0
2,492,284	-	yfdX	b2375	0.78	+1.5
2,492,288	+	yfdX	b2375	0.78	+0.6
2,492,294	-	yfdX	b2375	0.79	+2.5
2,492,327	+	yfdX	b2375	0.85	-2.8
2,492,362	+				+0.5
2,492,362	+				+0.5
2,492,390	+				-2.3
2,492,390	+				-1.2
2,492,390	+				-0.3
2,492,409	+				-1.4
2,492,465	+				+0.5
2,492,485	+				+1.5
2,492,687	-				+2.5
2,492,771	-	ypdI	b2376	0.18	+0.8
2,492,771	-	ypdI	b2376	0.18	-1.1
2,492,771	-	ypdI	b2376	0.18	-2.5
2,492,771	-	ypdI	b2376	0.18	-0.8
2,492,818	-	ypdI	b2376	0.36	+0.3
2,492,818	-	ypdI	b2376	0.36	-0.5
2,492,826	-	ypdI	b2376	0.38	-0.8
2,492,828	-	ypdI	b2376	0.39	+0.1
2,492,848	+	ypdI	b2376	0.46	+0.5
2,492,855	+	ypdI	b2376	0.49	-0.9
2,492,861	-	ypdI	b2376	0.51	-0.2
2,492,865	+	ypdI	b2376	0.53	-0.6
2,492,873	-	ypdI	b2376	0.55	-0.1
2,492,873	-	ypdI	b2376	0.55	+2.7
2,492,929	-	ypdI	b2376	0.76	-0.3
2,492,929	-	ypdI	b2376	0.76	+0.3
2,493,005	+				+2.5
2,493,043	-				+0.2
2,493,043	-				+0.3
2,493,043	-				+1.1
2,493,056	+				+1.5
2,493,061	+				+2.5
2,493,064	-				-0.5
2,493,064	-				+0.3
2,493,075	-				+0.6
2,493,075	-				-0.0
2,493,081	+				-2.1
2,493,081	+				+0.2
2,493,095	-				+0.2
2,493,159	-	yfdY	b2377	0.36	-0.7
2,493,159	-	yfdY	b2377	0.36	-0.2
2,493,220	+	yfdY	b2377	0.61	-0.1
2,493,267	-	yfdY	b2377	0.80	-2.4
2,493,267	-	yfdY	b2377	0.80	+1.1