Strain Fitness in Escherichia coli BW25113 around b2218

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
2,314,102	+				-0.2
2,314,202	-				+0.3
2,314,311	+	rcsB	b2217	0.17	+0.6
2,314,319	+	rcsB	b2217	0.18	-0.8
2,314,323	+	rcsB	b2217	0.19	+0.6
2,314,362	-	rcsB	b2217	0.25	-1.3
2,314,362	-	rcsB	b2217	0.25	-0.4
2,314,439	-	rcsB	b2217	0.37	-0.5
2,314,439	-	rcsB	b2217	0.37	+0.4
2,314,490	+	rcsB	b2217	0.45	-1.8
2,314,490	+	rcsB	b2217	0.45	-0.8
2,314,565	+	rcsB	b2217	0.56	-0.2
2,314,599	+	rcsB	b2217	0.61	+1.1
2,314,773	+	rcsB	b2217	0.88	-0.6
2,314,812	-				+1.0
2,315,032	-				-0.1
2,315,045	-				+0.8
2,315,139	+				+1.6
2,315,341	+	rcsC	b2218	0.10	+1.3
2,315,548	+	rcsC	b2218	0.18	+1.1
2,315,559	-	rcsC	b2218	0.18	+1.6
2,315,678	+	rcsC	b2218	0.22	+1.8
2,315,702	+	rcsC	b2218	0.23	+0.6
2,315,745	+	rcsC	b2218	0.24	+0.6
2,315,782	+	rcsC	b2218	0.26	+1.6
2,315,785	-	rcsC	b2218	0.26	+1.3
2,315,785	-	rcsC	b2218	0.26	+1.7
2,315,875	-	rcsC	b2218	0.29	+1.2
2,315,875	-	rcsC	b2218	0.29	+1.6
2,315,894	+	rcsC	b2218	0.30	+2.1
2,315,894	+	rcsC	b2218	0.30	+2.3
2,315,947	+	rcsC	b2218	0.32	+0.5
2,315,994	-	rcsC	b2218	0.33	+0.8
2,316,032	+	rcsC	b2218	0.34	+1.3
2,316,095	-	rcsC	b2218	0.37	+1.4
2,316,101	+	rcsC	b2218	0.37	+0.1
2,316,101	+	rcsC	b2218	0.37	+1.4
2,316,127	+	rcsC	b2218	0.38	+0.7
2,316,130	-	rcsC	b2218	0.38	+1.3
2,316,130	-	rcsC	b2218	0.38	+2.0
2,316,249	+	rcsC	b2218	0.42	+1.1
2,316,264	-	rcsC	b2218	0.43	+1.3
2,316,286	+	rcsC	b2218	0.43	+0.8
2,316,294	-	rcsC	b2218	0.44	+1.4
2,316,381	-	rcsC	b2218	0.47	+1.5
2,316,542	-	rcsC	b2218	0.52	+1.1
2,316,695	+	rcsC	b2218	0.58	+0.9
2,316,703	-	rcsC	b2218	0.58	+1.6
2,316,726	-	rcsC	b2218	0.59	+2.2
2,316,726	-	rcsC	b2218	0.59	+1.1
2,316,775	-	rcsC	b2218	0.61	+2.2
2,316,783	-	rcsC	b2218	0.61	+1.8
2,316,909	-	rcsC	b2218	0.65	+2.2
2,316,977	-	rcsC	b2218	0.68	+1.2
2,317,003	+	rcsC	b2218	0.69	+1.5
2,317,012	+	rcsC	b2218	0.69	+1.2
2,317,046	+	rcsC	b2218	0.70	+1.2
2,317,051	-	rcsC	b2218	0.70	+0.8
2,317,181	+	rcsC	b2218	0.75	+0.9
2,317,315	+	rcsC	b2218	0.80	+1.9
2,317,395	+	rcsC	b2218	0.82	+1.5
2,317,416	-	rcsC	b2218	0.83	+1.8
2,317,538	-	rcsC	b2218	0.87	+1.9
2,317,589	+	rcsC	b2218	0.89	+0.8
2,317,635	-				+1.7
2,317,682	+				+1.6
2,317,818	-				+1.9
2,317,822	-				+1.2
2,317,931	+				+0.0
2,317,936	+				+0.8
2,318,000	-				+1.4
2,318,000	-				-2.0
2,318,067	+				+0.8
2,318,114	+				+0.2
2,318,128	-				-0.3
2,318,163	-				+0.8
2,318,189	-				-0.4
2,318,244	+				+0.6
2,318,265	-	atoS	b2219	0.11	-0.1
2,318,371	-	atoS	b2219	0.17	+0.1
2,318,461	-	atoS	b2219	0.22	-1.0
2,318,462	-	atoS	b2219	0.22	+0.6
2,318,473	-	atoS	b2219	0.22	+1.4
2,318,473	-	atoS	b2219	0.22	+1.3
2,318,473	-	atoS	b2219	0.22	-0.8
2,318,514	+	atoS	b2219	0.25	-0.1
2,318,514	+	atoS	b2219	0.25	+0.1
2,318,558	+	atoS	b2219	0.27	+0.2
2,318,558	+	atoS	b2219	0.27	+0.5
2,318,610	+	atoS	b2219	0.30	-0.2
2,318,664	+	atoS	b2219	0.33	+0.2
2,318,672	-	atoS	b2219	0.33	+0.2
2,318,810	+	atoS	b2219	0.41	-0.2
2,318,827	-	atoS	b2219	0.42	+0.4