Strain Fitness in Escherichia coli BW25113 around b2141

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
2,227,663	+	dusC	b2140	0.21	+1.4
2,227,663	+	dusC	b2140	0.21	+0.9
2,227,671	-	dusC	b2140	0.22	-1.5
2,227,671	-	dusC	b2140	0.22	-1.2
2,227,671	-	dusC	b2140	0.22	-0.0
2,227,671	-	dusC	b2140	0.22	-0.1
2,227,671	-	dusC	b2140	0.22	+0.9
2,227,674	+	dusC	b2140	0.23	+2.4
2,227,675	-	dusC	b2140	0.23	-0.4
2,227,676	-	dusC	b2140	0.23	-0.0
2,227,747	-	dusC	b2140	0.30	+0.2
2,227,752	-	dusC	b2140	0.31	+0.9
2,227,752	-	dusC	b2140	0.31	+0.9
2,227,767	+	dusC	b2140	0.32	-1.4
2,227,767	+	dusC	b2140	0.32	+0.1
2,227,791	-	dusC	b2140	0.35	+0.0
2,227,791	-	dusC	b2140	0.35	-0.1
2,227,791	-	dusC	b2140	0.35	+0.5
2,227,808	-	dusC	b2140	0.37	-1.6
2,227,808	-	dusC	b2140	0.37	+0.4
2,227,862	+	dusC	b2140	0.42	-0.3
2,227,862	+	dusC	b2140	0.42	-0.0
2,227,891	-	dusC	b2140	0.45	-1.5
2,227,918	-	dusC	b2140	0.48	+0.5
2,228,138	+	dusC	b2140	0.72	+0.2
2,228,327	-				-2.5
2,228,444	-				-0.0
2,228,444	-				+0.3
2,228,446	-				+0.9
2,228,446	-				-0.2
2,228,530	-				+0.2
2,228,542	-				-0.8
2,228,542	-				+0.6
2,228,637	-				-3.2
2,228,637	-				+1.1
2,228,716	-	yohJ	b2141	0.18	+0.7
2,228,716	-	yohJ	b2141	0.18	-0.0
2,228,753	+	yohJ	b2141	0.27	+1.0
2,228,753	+	yohJ	b2141	0.27	+0.6
2,228,951	+	yohJ	b2141	0.76	+0.4
2,229,015	+				-0.3
2,229,068	-				-3.6
2,229,123	-	yohK	b2142	0.12	-0.6
2,229,123	-	yohK	b2142	0.12	+0.3
2,229,123	-	yohK	b2142	0.12	+1.2
2,229,123	-	yohK	b2142	0.12	-0.4
2,229,190	+	yohK	b2142	0.21	-0.8
2,229,221	+	yohK	b2142	0.26	+1.0
2,229,221	+	yohK	b2142	0.26	-0.6
2,229,259	+	yohK	b2142	0.31	-0.7
2,229,272	-	yohK	b2142	0.33	-1.1
2,229,279	+	yohK	b2142	0.34	-0.3
2,229,279	+	yohK	b2142	0.34	-0.1
2,229,284	+	yohK	b2142	0.35	+0.1
2,229,284	+	yohK	b2142	0.35	+0.0
2,229,292	-	yohK	b2142	0.36	-0.3
2,229,525	+	yohK	b2142	0.70	+1.4
2,229,580	+	yohK	b2142	0.77	+0.7
2,229,588	-	yohK	b2142	0.79	-0.5
2,229,672	-				+0.5
2,229,728	-				-0.4
2,229,728	-				-1.0
2,229,972	-	cdd	b2143	0.12	+0.1
2,229,972	-	cdd	b2143	0.12	+0.4
2,229,984	-	cdd	b2143	0.13	-0.4