Strain Fitness in Escherichia coli BW25113 around b2110

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
2,187,968	-	yehB	b2109	0.61	+0.6
2,187,971	-	yehB	b2109	0.61	+0.6
2,187,974	-	yehB	b2109	0.61	-0.1
2,187,974	-	yehB	b2109	0.61	-0.1
2,187,978	-	yehB	b2109	0.62	+0.2
2,187,978	-	yehB	b2109	0.62	+1.3
2,187,983	-	yehB	b2109	0.62	-0.1
2,187,985	+	yehB	b2109	0.62	+0.9
2,188,001	-	yehB	b2109	0.62	+0.3
2,188,011	+	yehB	b2109	0.63	+0.3
2,188,056	+	yehB	b2109	0.65	+2.1
2,188,056	+	yehB	b2109	0.65	+1.0
2,188,056	+	yehB	b2109	0.65	+1.4
2,188,064	-	yehB	b2109	0.65	+0.6
2,188,064	-	yehB	b2109	0.65	+0.6
2,188,106	-				+1.8
2,188,106	-	yehB	b2109	0.67	-2.3
2,188,120	+	yehB	b2109	0.67	-0.4
2,188,123	-	yehB	b2109	0.67	-0.2
2,188,164	+	yehB	b2109	0.69	+0.4
2,188,164	+	yehB	b2109	0.69	+1.6
2,188,171	-	yehB	b2109	0.69	+0.2
2,188,179	+	yehB	b2109	0.70	-1.5
2,188,195	+	yehB	b2109	0.70	-0.6
2,188,202	-	yehB	b2109	0.71	+0.4
2,188,210	-	yehB	b2109	0.71	-0.7
2,188,210	-	yehB	b2109	0.71	-0.6
2,188,210	-	yehB	b2109	0.71	-0.2
2,188,213	-	yehB	b2109	0.71	-2.2
2,188,213	-	yehB	b2109	0.71	+0.6
2,188,243	+	yehB	b2109	0.72	+0.1
2,188,243	+	yehB	b2109	0.72	+1.4
2,188,243	+	yehB	b2109	0.72	+2.4
2,188,246	-	yehB	b2109	0.72	+0.5
2,188,246	-	yehB	b2109	0.72	+0.6
2,188,248	-	yehB	b2109	0.72	+0.1
2,188,248	-	yehB	b2109	0.72	+0.7
2,188,251	-	yehB	b2109	0.73	+0.8
2,188,251	-	yehB	b2109	0.73	+0.0
2,188,258	-	yehB	b2109	0.73	+0.2
2,188,262	-	yehB	b2109	0.73	+0.4
2,188,299	+	yehB	b2109	0.74	-1.5
2,188,300	-	yehB	b2109	0.74	-2.4
2,188,317	+	yehB	b2109	0.75	-0.3
2,188,355	+	yehB	b2109	0.77	-1.7
2,188,362	-	yehB	b2109	0.77	+3.4
2,188,372	-	yehB	b2109	0.77	-1.7
2,188,395	+	yehB	b2109	0.78	-0.7
2,188,406	+	yehB	b2109	0.79	+1.4
2,188,449	-	yehB	b2109	0.80	+2.4
2,188,484	-	yehB	b2109	0.82	-0.6
2,188,484	-				-0.3
2,188,486	-	yehB	b2109	0.82	-0.2
2,188,519	+	yehB	b2109	0.83	+0.9
2,188,535	-	yehB	b2109	0.84	+0.4
2,188,540	-	yehB	b2109	0.84	+0.9
2,188,540	-	yehB	b2109	0.84	-0.4
2,188,540	-	yehB	b2109	0.84	+0.9
2,188,540	-	yehB	b2109	0.84	+0.6
2,188,578	+	yehB	b2109	0.86	+0.9
2,188,578	+	yehB	b2109	0.86	+0.9
2,188,583	+	yehB	b2109	0.86	+2.4
2,188,586	-	yehB	b2109	0.86	-0.7
2,188,596	-	yehB	b2109	0.86	+0.1
2,188,596	-	yehB	b2109	0.86	-1.3
2,188,597	-	yehB	b2109	0.86	+0.3
2,188,655	+	yehB	b2109	0.89	-0.6
2,188,655	+	yehB	b2109	0.89	+0.1
2,188,655	+	yehB	b2109	0.89	+0.1
2,189,462	+	yehC	b2110	0.71	+2.4
2,189,498	+	yehC	b2110	0.76	+0.9
2,189,498	+	yehC	b2110	0.76	+2.4
2,189,574	+	yehC	b2110	0.87	+0.9
2,189,574	+	yehC	b2110	0.87	+2.4
2,189,574	+	yehC	b2110	0.87	+2.4
2,189,582	-	yehC	b2110	0.88	+1.5
2,189,726	-				-1.1
2,189,740	-				+0.9
2,189,751	-				-0.4
2,189,799	+	yehD	b2111	0.18	+0.6
2,189,808	-	yehD	b2111	0.20	+0.1
2,189,840	-	yehD	b2111	0.25	+0.4
2,189,840	-	yehD	b2111	0.25	+2.0
2,189,908	-	yehD	b2111	0.38	+2.4
2,190,294	-				-1.4
2,190,302	-				+2.4
2,190,520	-				+0.2
2,190,566	-	yehE	b2112	0.10	+0.3
2,190,567	-	yehE	b2112	0.11	+0.1
2,190,581	+	yehE	b2112	0.16	+2.4
2,190,587	-	yehE	b2112	0.18	+0.4
2,190,587	-	yehE	b2112	0.18	+0.2
2,190,587	-	yehE	b2112	0.18	-0.5
2,190,595	-	yehE	b2112	0.21	+0.6
2,190,595	-	yehE	b2112	0.21	-1.4
2,190,598	-	yehE	b2112	0.22	-0.1
2,190,598	-	yehE	b2112	0.22	-0.1
2,190,601	-				+1.2
2,190,608	-	yehE	b2112	0.25	-0.1
2,190,608	-	yehE	b2112	0.25	-0.1
2,190,610	-	yehE	b2112	0.26	+0.6
2,190,610	-	yehE	b2112	0.26	+0.1
2,190,610	-	yehE	b2112	0.26	+0.6
2,190,637	-	yehE	b2112	0.35	+0.7
2,190,637	-	yehE	b2112	0.35	-0.3
2,190,641	+	yehE	b2112	0.37	+2.4
2,190,643	+	yehE	b2112	0.38	+0.4
2,190,644	-	yehE	b2112	0.38	+0.3
2,190,648	+	yehE	b2112	0.39	+0.4
2,190,649	+	yehE	b2112	0.40	-0.4
2,190,651	-	yehE	b2112	0.40	-0.3
2,190,651	-	yehE	b2112	0.40	+1.5
2,190,651	-	yehE	b2112	0.40	-0.2