Strain Fitness in Escherichia coli BW25113 around b1430
Experiment: Ying_Others16 rep B; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Ying_Others16 rep B; time point 1 |
|---|---|---|---|---|---|
| remove | |||||
| 1,498,779 | - | tehA | b1429 | 0.18 | +1.0 |
| 1,499,017 | - | tehA | b1429 | 0.42 | +2.3 |
| 1,499,151 | + | tehA | b1429 | 0.56 | +1.9 |
| 1,499,640 | + | -0.1 | |||
| 1,499,650 | - | tehB | b1430 | 0.11 | +0.7 |
| 1,499,699 | - | tehB | b1430 | 0.19 | +1.1 |
| 1,499,709 | - | tehB | b1430 | 0.21 | -0.1 |
| 1,499,726 | + | tehB | b1430 | 0.24 | +0.7 |
| 1,499,741 | - | tehB | b1430 | 0.26 | +2.0 |
| 1,499,831 | - | tehB | b1430 | 0.41 | +0.8 |
| 1,499,859 | - | tehB | b1430 | 0.46 | -0.2 |
| 1,499,991 | + | tehB | b1430 | 0.68 | +0.1 |
| 1,499,991 | + | tehB | b1430 | 0.68 | -0.3 |
| 1,500,069 | + | tehB | b1430 | 0.81 | +0.6 |
| 1,500,069 | + | tehB | b1430 | 0.81 | +0.8 |
| 1,500,113 | - | tehB | b1430 | 0.89 | +0.7 |
| 1,500,128 | + | -0.7 | |||
| 1,500,128 | + | +1.3 | |||
| 1,500,191 | - | +0.1 | |||
| 1,500,191 | - | -0.8 | |||
| 1,500,496 | - | +0.3 | |||
| 1,500,496 | - | -0.2 | |||
| 1,500,540 | - | +2.3 | |||
| 1,500,542 | - | +0.5 | |||
| 1,500,685 | + | ydcL | b1431 | 0.30 | -0.4 |
| 1,500,726 | + | ydcL | b1431 | 0.37 | -0.4 |
| 1,500,762 | + | ydcL | b1431 | 0.42 | +0.4 |
| 1,500,946 | + | ydcL | b1431 | 0.70 | -0.1 |
| 1,501,107 | + | -1.1 | |||
| 1,501,107 | + | -0.4 | |||
| 1,501,126 | - | +1.0 |
Or see this region's nucleotide sequence