Strain Fitness in Escherichia coli BW25113 around b1286
Experiment: Ying_Others16 rep B; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_Others16 rep B; time point 1 |
---|---|---|---|---|---|
remove | |||||
1,344,018 | + | gmr | b1285 | 0.62 | -2.4 |
1,344,084 | - | gmr | b1285 | 0.66 | -2.5 |
1,344,111 | + | gmr | b1285 | 0.67 | -2.6 |
1,344,215 | + | gmr | b1285 | 0.72 | -0.1 |
1,344,256 | - | gmr | b1285 | 0.74 | -0.7 |
1,344,290 | - | gmr | b1285 | 0.76 | -0.8 |
1,344,481 | + | gmr | b1285 | 0.86 | +0.1 |
1,345,121 | + | +0.9 | |||
1,345,306 | - | rnb | b1286 | 0.16 | -1.1 |
1,345,321 | - | rnb | b1286 | 0.16 | +2.4 |
1,345,321 | - | rnb | b1286 | 0.16 | +0.9 |
1,345,492 | - | rnb | b1286 | 0.25 | +1.5 |
1,345,550 | - | rnb | b1286 | 0.28 | +1.6 |
1,345,727 | + | rnb | b1286 | 0.37 | +0.0 |
1,345,736 | - | rnb | b1286 | 0.38 | +0.9 |
1,346,088 | + | rnb | b1286 | 0.56 | +1.5 |
1,346,451 | - | rnb | b1286 | 0.75 | -2.2 |
1,346,615 | + | rnb | b1286 | 0.83 | -0.3 |
1,346,966 | + | +0.3 | |||
1,347,070 | - | +0.8 | |||
1,347,070 | - | +0.8 | |||
1,347,370 | - | yciW | b1287 | 0.32 | -0.0 |
1,347,512 | + | yciW | b1287 | 0.45 | +0.6 |
1,347,594 | - | yciW | b1287 | 0.52 | +0.7 |
1,347,924 | - | yciW | b1287 | 0.82 | +0.1 |
Or see this region's nucleotide sequence