Strain Fitness in Escherichia coli BW25113 around b0953

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
1,013,949	-	pqiB	b0951	0.89	+0.7
1,013,955	+	pqiB	b0951	0.90	+1.2
1,013,955	+	pqiB	b0951	0.90	-1.3
1,014,064	-				+1.3
1,014,064	-				-0.4
1,014,159	-				-1.6
1,014,206	+	ymbA	b0952	0.15	+0.5
1,014,216	+	ymbA	b0952	0.17	-0.5
1,014,216	+	ymbA	b0952	0.17	-1.4
1,014,263	+	ymbA	b0952	0.26	-0.4
1,014,268	+	ymbA	b0952	0.26	-0.6
1,014,303	-	ymbA	b0952	0.33	-0.3
1,014,428	-	ymbA	b0952	0.55	-0.4
1,014,428	-	ymbA	b0952	0.55	-0.5
1,014,587	+	ymbA	b0952	0.83	-0.5
1,014,588	+	ymbA	b0952	0.83	-0.2
1,014,588	+	ymbA	b0952	0.83	-0.5
1,014,619	-	ymbA	b0952	0.89	-0.1
1,014,959	+	rmf	b0953	0.12	-1.4
1,014,974	+	rmf	b0953	0.21	-0.0
1,014,974	+	rmf	b0953	0.21	-1.1
1,015,089	+				+0.2
1,015,097	-				+0.2
1,015,736	-				+0.4
1,015,736	-				+0.3
1,015,736	-				+0.4
1,015,740	-				-1.0
1,015,740	-				+1.4
1,015,876	+				-0.1
1,015,878	-				+0.6
1,015,894	-				-1.2
1,015,922	-				+0.6
1,015,935	+				-0.0
1,015,967	-	ycbZ	b0955	0.12	-1.0
1,015,967	-	ycbZ	b0955	0.12	+1.2
1,015,989	+	ycbZ	b0955	0.13	+0.4
1,016,003	+	ycbZ	b0955	0.14	-0.0
1,016,003	+	ycbZ	b0955	0.14	+0.0
1,016,012	+	ycbZ	b0955	0.14	+0.8