Strain Fitness in Escherichia coli BW25113 around b0912
Experiment: Ying_Others16 rep B; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_Others16 rep B; time point 1 |
---|---|---|---|---|---|
remove | |||||
963,138 | + | ihfB | b0912 | 0.31 | +2.0 |
963,207 | + | ihfB | b0912 | 0.55 | +0.6 |
963,207 | + | ihfB | b0912 | 0.55 | +1.9 |
963,215 | - | ihfB | b0912 | 0.58 | +2.1 |
963,239 | + | ihfB | b0912 | 0.66 | +2.0 |
963,294 | - | ihfB | b0912 | 0.85 | +1.3 |
963,529 | + | -1.8 | |||
963,568 | - | -0.8 | |||
963,679 | - | -0.5 | |||
963,779 | + | ycaI | b0913 | 0.10 | -0.5 |
963,962 | - | ycaI | b0913 | 0.18 | -1.7 |
964,099 | - | ycaI | b0913 | 0.25 | -0.8 |
964,255 | + | ycaI | b0913 | 0.31 | +0.4 |
Or see this region's nucleotide sequence