Strain Fitness in Escherichia coli BW25113 around b0798
Experiment: Ying_Others16 rep B; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_Others16 rep B; time point 1 |
---|---|---|---|---|---|
remove | |||||
830,836 | + | rhlE | b0797 | 0.54 | +0.8 |
830,850 | - | rhlE | b0797 | 0.55 | -0.9 |
830,860 | - | rhlE | b0797 | 0.56 | -0.9 |
830,860 | - | rhlE | b0797 | 0.56 | -0.8 |
831,483 | + | -0.7 | |||
831,535 | - | -0.4 | |||
831,542 | - | +0.2 | |||
831,542 | - | +1.7 | |||
831,679 | + | -0.3 | |||
831,679 | + | -0.7 | |||
831,733 | - | +1.0 | |||
831,733 | - | +0.4 | |||
831,752 | + | ybiA | b0798 | 0.13 | +0.6 |
831,752 | + | ybiA | b0798 | 0.13 | +0.3 |
831,942 | - | ybiA | b0798 | 0.52 | +0.6 |
832,127 | + | +0.3 | |||
832,127 | + | -0.5 | |||
832,158 | - | +0.0 | |||
832,250 | + | -0.1 | |||
832,353 | - | +0.1 | |||
832,645 | + | dinG | b0799 | 0.16 | +0.5 |
832,645 | + | dinG | b0799 | 0.16 | -0.3 |
832,673 | + | dinG | b0799 | 0.18 | +0.4 |
832,692 | + | dinG | b0799 | 0.19 | -0.1 |
833,081 | - | dinG | b0799 | 0.37 | +0.2 |
833,102 | + | dinG | b0799 | 0.38 | -0.0 |
Or see this region's nucleotide sequence