Strain Fitness in Escherichia coli BW25113 around b3013

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
3,154,694	+				-0.5
3,154,702	-				+0.2
3,154,821	-	yqhE	b3012	0.21	-0.9
3,154,821	-	yqhE	b3012	0.21	-0.5
3,154,906	+	yqhE	b3012	0.32	-0.2
3,154,909	+	yqhE	b3012	0.32	+0.4
3,154,919	+	yqhE	b3012	0.33	+0.5
3,154,963	-	yqhE	b3012	0.38	-2.5
3,154,976	-	yqhE	b3012	0.40	-1.0
3,154,976	-	yqhE	b3012	0.40	+0.9
3,155,101	+	yqhE	b3012	0.55	+0.8
3,155,121	-	yqhE	b3012	0.57	+0.7
3,155,121	-	yqhE	b3012	0.57	+0.8
3,155,160	-	yqhE	b3012	0.62	+0.8
3,155,163	+	yqhE	b3012	0.63	-0.2
3,155,163	+	yqhE	b3012	0.63	-0.9
3,155,163	+	yqhE	b3012	0.63	-0.4
3,155,271	-	yqhE	b3012	0.76	+0.7
3,155,318	+	yqhE	b3012	0.81	+0.0
3,155,318	+	yqhE	b3012	0.81	-0.3
3,155,382	-	yqhE	b3012	0.89	+0.8
3,155,382	-	yqhE	b3012	0.89	-0.4
3,155,382	-				+0.8
3,155,382	-	yqhE	b3012	0.89	+0.1
3,155,431	+				+0.4
3,155,449	+				-0.8
3,155,458	-				-1.6
3,155,493	+				-0.9
3,155,582	+				+0.2
3,155,601	-				-0.1
3,155,605	+				+0.1
3,155,627	+				-0.2
3,155,627	+				-0.0
3,155,630	+				+0.4
3,155,632	+				+0.8
3,155,632	+				+1.3
3,155,648	+				+0.5
3,155,726	-				-0.8
3,155,732	+				+0.2
3,155,734	+				+0.2
3,155,734	+				+1.7
3,155,738	-				-0.5
3,155,740	-				-0.2
3,155,740	-				-0.5
3,155,742	-				-0.1
3,155,750	-				-1.2
3,155,827	+	yqhG	b3013	0.17	+0.4
3,155,827	+	yqhG	b3013	0.17	+0.9
3,155,841	+	yqhG	b3013	0.18	-0.2
3,155,844	+	yqhG	b3013	0.19	+1.3
3,155,844	+	yqhG	b3013	0.19	-0.0
3,155,846	+	yqhG	b3013	0.19	+0.0
3,155,857	+	yqhG	b3013	0.20	+0.6
3,155,861	-	yqhG	b3013	0.20	+0.0
3,155,889	+	yqhG	b3013	0.23	+0.3
3,155,955	+	yqhG	b3013	0.31	+1.4
3,155,955	+	yqhG	b3013	0.31	-0.3
3,155,981	+	yqhG	b3013	0.33	-0.5
3,156,131	-	yqhG	b3013	0.50	+0.0
3,156,363	+	yqhG	b3013	0.75	+0.3
3,156,679	-	yqhH	b3014	0.12	+0.1
3,156,691	+	yqhH	b3014	0.16	-0.4
3,156,783	+	yqhH	b3014	0.52	-0.4
3,156,783	+	yqhH	b3014	0.52	-0.0
3,156,791	-	yqhH	b3014	0.55	-3.0
3,156,791	-	yqhH	b3014	0.55	+0.5
3,156,856	+	yqhH	b3014	0.80	+0.1
3,156,859	-	yqhH	b3014	0.81	-2.1
3,156,859	-	yqhH	b3014	0.81	+0.5
3,157,016	-				-0.6
3,157,048	-				-0.4
3,157,087	+				+0.3
3,157,335	+	ygiQ	b4469	0.17	+0.5
3,157,335	+	ygiQ	b4469	0.17	+0.5
3,157,383	-	ygiQ	b4469	0.20	-0.7
3,157,421	+	ygiQ	b4469	0.21	-0.1
3,157,456	-	ygiQ	b4469	0.23	+0.4
3,157,486	-	ygiQ	b4469	0.24	-0.0
3,157,486	-	ygiQ	b4469	0.24	-0.4
3,157,527	+	ygiQ	b4469	0.26	+0.3
3,157,536	+	ygiQ	b4469	0.26	+0.4
3,157,536	+	ygiQ	b4469	0.26	+0.5
3,157,536	+	ygiQ	b4469	0.26	+0.0
3,157,541	+	ygiQ	b4469	0.27	+0.0
3,157,565	+	ygiQ	b4469	0.28	+0.8
3,157,565	+	ygiQ	b4469	0.28	-1.5