Strain Fitness in Escherichia coli BW25113 around b3207

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
3,345,698	+	yhbJ	b3205	0.66	-1.3
3,345,698	+	yhbJ	b3205	0.66	+0.1
3,345,735	+	yhbJ	b3205	0.70	-0.2
3,345,863	-	yhbJ	b3205	0.85	-0.6
3,345,863	-	yhbJ	b3205	0.85	+0.1
3,345,892	-	yhbJ	b3205	0.88	-4.3
3,345,892	-	yhbJ	b3205	0.88	-0.7
3,345,909	-				-2.1
3,345,953	+				-0.7
3,346,034	-	npr	b3206	0.17	+0.1
3,346,147	+	npr	b3206	0.58	-0.7
3,346,173	-	npr	b3206	0.68	+0.6
3,346,174	+	npr	b3206	0.68	+1.0
3,346,174	+	npr	b3206	0.68	-3.4
3,346,186	-	npr	b3206	0.73	+0.5
3,346,196	-	npr	b3206	0.76	-0.1
3,346,286	+				-0.2
3,346,286	+				+1.8
3,346,444	-				+0.3
3,346,487	-				-1.3
3,346,655	+	yrbL	b3207	0.29	+0.2
3,346,688	-	yrbL	b3207	0.34	+0.8
3,346,697	-	yrbL	b3207	0.35	+2.5
3,346,795	+	yrbL	b3207	0.51	+0.4
3,346,809	+	yrbL	b3207	0.53	+0.3
3,346,921	+	yrbL	b3207	0.71	+0.6
3,346,921	+	yrbL	b3207	0.71	+0.9
3,346,932	-	yrbL	b3207	0.72	+0.1
3,346,965	-	yrbL	b3207	0.78	-2.4
3,346,972	+	yrbL	b3207	0.79	+0.2
3,346,980	-	yrbL	b3207	0.80	-0.0
3,346,980	-	yrbL	b3207	0.80	+2.2
3,346,986	+	yrbL	b3207	0.81	+0.3
3,346,986	+	yrbL	b3207	0.81	-0.0
3,347,046	+				-2.0
3,347,086	-				-0.1
3,347,092	-				-0.9
3,347,111	+				+1.8
3,347,151	-				-0.6
3,347,178	+	mtgA	b3208	0.10	-0.3
3,347,178	+	mtgA	b3208	0.10	+0.5
3,347,178	+	mtgA	b3208	0.10	-0.3
3,347,178	+	mtgA	b3208	0.10	+0.0
3,347,184	+	mtgA	b3208	0.11	-0.5
3,347,192	-	mtgA	b3208	0.12	-0.6
3,347,205	-	mtgA	b3208	0.14	-2.8
3,347,205	-	mtgA	b3208	0.14	-0.0
3,347,226	+	mtgA	b3208	0.17	-2.1
3,347,226	+	mtgA	b3208	0.17	+0.1
3,347,278	+	mtgA	b3208	0.24	+0.3
3,347,278	+	mtgA	b3208	0.24	-0.8
3,347,311	+	mtgA	b3208	0.29	+0.3
3,347,311	+	mtgA	b3208	0.29	-1.2
3,347,386	+				-1.0
3,347,400	+	mtgA	b3208	0.41	-0.5
3,347,430	+	mtgA	b3208	0.45	+0.5
3,347,466	+	mtgA	b3208	0.50	-0.5
3,347,515	+	mtgA	b3208	0.57	+0.7
3,347,520	+	mtgA	b3208	0.57	+0.3
3,347,528	-	mtgA	b3208	0.58	+1.4
3,347,528	-	mtgA	b3208	0.58	+0.8
3,347,534	-	mtgA	b3208	0.59	-0.3
3,347,621	+	mtgA	b3208	0.71	-0.4
3,347,634	-	mtgA	b3208	0.73	+1.1
3,347,634	-	mtgA	b3208	0.73	+1.7
3,347,710	-	mtgA	b3208	0.83	-0.8
3,347,713	+	mtgA	b3208	0.84	-0.3
3,347,725	+	mtgA	b3208	0.85	+0.1
3,347,725	+	mtgA	b3208	0.85	-0.4
3,347,738	-	mtgA	b3208	0.87	-0.8
3,347,778	-				+0.1
3,347,820	-				+0.6
3,347,904	+	yhbL	b3209	0.12	+1.2
3,347,904	+	yhbL	b3209	0.12	+0.9
3,347,911	-	yhbL	b3209	0.13	-0.5
3,347,916	-	yhbL	b3209	0.13	-0.1
3,347,975	-	yhbL	b3209	0.22	-1.4
3,348,075	+	yhbL	b3209	0.38	+0.4