Strain Fitness in Escherichia coli BW25113 around b2429

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
2,543,880	-				-2.7
2,543,935	-	yfeU	b2428	0.16	+0.3
2,544,000	+	yfeU	b2428	0.23	+0.8
2,544,058	-	yfeU	b2428	0.29	+0.1
2,544,130	-	yfeU	b2428	0.37	-0.2
2,544,130	-	yfeU	b2428	0.37	-1.7
2,544,390	-	yfeU	b2428	0.66	+0.9
2,544,425	+	yfeU	b2428	0.70	-0.7
2,544,425	+	yfeU	b2428	0.70	+0.0
2,544,686	+				-1.0
2,544,693	-				-0.3
2,544,704	-				-0.3
2,544,717	-				-1.2
2,544,727	+				-0.6
2,544,801	+				-1.5
2,544,801	+				-1.8
2,544,811	-				-2.1
2,544,811	-				-1.1
2,544,964	-	murP	b2429	0.19	-0.7
2,545,000	-	murP	b2429	0.21	-0.7
2,545,234	-	murP	b2429	0.38	-0.4
2,545,234	-	murP	b2429	0.38	+0.3
2,545,234	-	murP	b2429	0.38	-3.5
2,545,236	-	murP	b2429	0.38	-0.3
2,545,306	-	murP	b2429	0.43	-0.3
2,545,347	+	murP	b2429	0.46	-0.7
2,545,445	-	murP	b2429	0.53	-1.9
2,545,471	-	murP	b2429	0.54	-1.1
2,545,471	-	murP	b2429	0.54	-3.1
2,545,494	-	murP	b2429	0.56	-1.0
2,545,494	-	murP	b2429	0.56	+0.2
2,545,559	+	murP	b2429	0.61	-1.2
2,545,559	+	murP	b2429	0.61	-0.5
2,545,620	+	murP	b2429	0.65	-1.2
2,545,637	+	murP	b2429	0.66	-0.8
2,545,761	-	murP	b2429	0.75	-0.2
2,545,768	+	murP	b2429	0.75	-0.5
2,545,768	+	murP	b2429	0.75	-0.5
2,545,786	-	murP	b2429	0.77	-2.8
2,545,886	+	murP	b2429	0.84	-0.2
2,546,146	-				-0.3
2,546,233	-				+0.1
2,546,239	+				+0.7
2,546,412	+	b2430	b2430	0.22	-0.2
2,546,420	-	b2430	b2430	0.23	+0.0
2,546,420	-	b2430	b2430	0.23	+0.8
2,546,423	+	b2430	b2430	0.23	-1.9
2,546,489	-	b2430	b2430	0.28	-1.3
2,546,489	-	b2430	b2430	0.28	-0.3
2,546,663	-	b2430	b2430	0.41	+0.1
2,546,674	+	b2430	b2430	0.42	+0.2
2,546,758	+	b2430	b2430	0.49	+0.4
2,546,844	+	b2430	b2430	0.55	+0.1
2,546,969	-	b2430	b2430	0.65	+0.4
2,546,969	-	b2430	b2430	0.65	+0.2
2,547,030	+	b2430	b2430	0.69	-0.3
2,547,062	-	b2430	b2430	0.72	-0.9
2,547,062	-	b2430	b2430	0.72	+1.0
2,547,071	-	b2430	b2430	0.73	+0.4
2,547,087	-	b2430	b2430	0.74	+0.8