Strain Fitness in Escherichia coli BW25113 around b2093

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
2,171,404	-	gatC	b2092	0.34	+0.6
2,171,562	+	gatC	b2092	0.46	+0.9
2,171,566	+	gatC	b2092	0.46	+0.1
2,171,583	-	gatC	b2092	0.47	+0.0
2,171,732	-	gatC	b2092	0.58	+0.4
2,171,762	-	gatC	b2092	0.60	+0.6
2,171,762	-	gatC	b2092	0.60	+0.7
2,171,771	-	gatC	b2092	0.61	+0.1
2,171,771	-	gatC	b2092	0.61	-0.7
2,171,871	+	gatC	b2092	0.68	+3.0
2,171,871	+	gatC	b2092	0.68	+0.9
2,171,879	-	gatC	b2092	0.69	-0.1
2,171,879	-	gatC	b2092	0.69	+1.0
2,171,960	-	gatC	b2092	0.75	-0.8
2,171,960	-	gatC	b2092	0.75	+1.3
2,172,073	-	gatC	b2092	0.83	-0.8
2,172,130	+	gatC	b2092	0.87	+1.4
2,172,137	-	gatC	b2092	0.88	-0.4
2,172,247	+				-0.8
2,172,255	+				-2.6
2,172,285	-				+0.1
2,172,285	-				-2.2
2,172,295	+				-0.4
2,172,296	-				-0.1
2,172,303	-				+0.9
2,172,305	-				-0.3
2,172,315	-				-0.8
2,172,430	-	gatB	b2093	0.44	+0.4
2,172,542	-	gatB	b2093	0.84	+0.0
2,172,552	-	gatB	b2093	0.87	+1.0
2,172,688	-	gatA	b2094	0.15	+0.5
2,172,690	-	gatA	b2094	0.16	-0.3
2,172,690	-	gatA	b2094	0.16	+0.2
2,172,716	-	gatA	b2094	0.21	-0.4
2,172,726	-	gatA	b2094	0.24	+1.3
2,172,807	-	gatA	b2094	0.42	+0.1
2,172,839	-	gatA	b2094	0.49	+0.1
2,172,917	-	gatA	b2094	0.66	+0.1
2,172,978	-	gatA	b2094	0.79	-0.0
2,172,978	-	gatA	b2094	0.79	-1.2
2,172,983	+	gatA	b2094	0.80	+2.4
2,173,004	-	gatA	b2094	0.85	+0.6
2,173,067	+				-1.2
2,173,075	-				+0.1
2,173,177	-				+0.4
2,173,177	-				-0.3
2,173,197	-				+0.5
2,173,197	-				-1.0
2,173,205	-				-0.3
2,173,205	-				+0.6
2,173,233	-	gatZ	b2095	0.12	-0.2
2,173,440	-	gatZ	b2095	0.28	-0.3
2,173,444	-	gatZ	b2095	0.29	-0.1
2,173,451	+	gatZ	b2095	0.29	-0.4
2,173,451	+	gatZ	b2095	0.29	+0.6
2,173,459	-	gatZ	b2095	0.30	+0.5
2,173,459	-	gatZ	b2095	0.30	-0.1
2,173,485	-	gatZ	b2095	0.32	+0.3
2,173,588	-	gatZ	b2095	0.40	-0.0