Strain Fitness in Escherichia coli BW25113 around b2085

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
2,165,031	+				+1.5
2,165,109	-				-3.1
2,165,109	-				-2.1
2,165,177	-	cyaR	b4438	0.45	+0.7
2,165,184	+	cyaR	b4438	0.53	-0.4
2,165,184	+	cyaR	b4438	0.53	+1.0
2,165,383	-	ogrK	b2082	0.26	-0.5
2,165,423	-	ogrK	b2082	0.44	-0.0
2,165,658	-	yegZ	b2083	0.15	-0.4
2,165,732	+	yegZ	b2083	0.50	-0.1
2,165,732	+	yegZ	b2083	0.50	+1.0
2,165,872	+				+0.3
2,165,894	-				+0.1
2,165,907	+				+0.2
2,165,929	+				-0.2
2,165,929	+				-0.5
2,165,964	+				-0.7
2,165,968	+				-0.2
2,166,018	+				+0.9
2,166,018	+				-1.5
2,166,023	+				+0.0
2,166,047	+	b2085	b2085	0.11	-1.0
2,166,047	+	b2085	b2085	0.11	+0.8
2,166,047	-	b2085	b2085	0.11	+2.9
2,166,047	-	b2085	b2085	0.11	+1.5
2,166,052	-	b2085	b2085	0.12	-1.9
2,166,054	+	b2085	b2085	0.13	+0.4
2,166,054	+	b2085	b2085	0.13	-2.0
2,166,054	+	b2085	b2085	0.13	-0.1
2,166,054	+	b2085	b2085	0.13	-0.3
2,166,054	+	b2085	b2085	0.13	-1.7
2,166,054	+	b2085	b2085	0.13	-1.2
2,166,055	+	b2085	b2085	0.13	+0.8
2,166,062	-	b2085	b2085	0.15	-1.3
2,166,102	+	b2085	b2085	0.28	-2.4
2,166,102	+	b2085	b2085	0.28	-3.2
2,166,155	+	b2085	b2085	0.45	+0.4
2,166,188	+	b2085	b2085	0.55	+2.4
2,166,188	+	b2085	b2085	0.55	+1.4
2,166,588	-				+1.4
2,166,634	-				-0.6
2,166,634	-				-0.2
2,166,635	-				-1.0
2,166,636	-				-1.3
2,166,661	-				+1.0
2,166,693	+				+0.4
2,166,693	+				+2.4
2,166,698	+				+0.9
2,166,708	-				-2.0
2,166,713	-				+1.4
2,166,723	-				+0.8
2,166,839	+	yegS	b2086	0.11	-0.7
2,166,846	-	yegS	b2086	0.12	-0.5
2,166,846	-	yegS	b2086	0.12	+2.4
2,166,850	-	yegS	b2086	0.13	-0.1
2,166,889	-	yegS	b2086	0.17	+1.2
2,166,889	-	yegS	b2086	0.17	-2.2
2,166,889	-	yegS	b2086	0.17	+0.2
2,166,889	-	yegS	b2086	0.17	+1.0
2,166,889	-	yegS	b2086	0.17	-1.4
2,166,894	-	yegS	b2086	0.18	+0.6
2,166,894	-	yegS	b2086	0.18	+0.2
2,166,900	+	yegS	b2086	0.18	-0.6
2,166,964	-	yegS	b2086	0.25	+1.1
2,166,972	+	yegS	b2086	0.26	-0.7
2,166,981	+	yegS	b2086	0.27	-1.9
2,167,040	+	yegS	b2086	0.34	-2.6
2,167,040	+	yegS	b2086	0.34	+0.6
2,167,040	+	yegS	b2086	0.34	-0.3
2,167,040	+	yegS	b2086	0.34	-0.2
2,167,047	-	yegS	b2086	0.35	-0.4
2,167,047	-	yegS	b2086	0.35	-1.2
2,167,048	-	yegS	b2086	0.35	+2.9
2,167,048	-	yegS	b2086	0.35	-0.2
2,167,049	+	yegS	b2086	0.35	-0.9
2,167,160	+	yegS	b2086	0.47	+1.1
2,167,170	+	yegS	b2086	0.48	-1.3
2,167,170	+	yegS	b2086	0.48	+0.4
2,167,220	-	yegS	b2086	0.54	-2.3
2,167,220	-	yegS	b2086	0.54	-1.8
2,167,221	+	yegS	b2086	0.54	-2.2
2,167,250	+	yegS	b2086	0.57	-0.2
2,167,256	+	yegS	b2086	0.58	+0.6
2,167,260	+	yegS	b2086	0.58	+0.4
2,167,260	-	yegS	b2086	0.58	-1.0
2,167,264	-	yegS	b2086	0.59	-0.4
2,167,299	-	yegS	b2086	0.63	-2.5
2,167,306	+	yegS	b2086	0.63	-0.7
2,167,306	+	yegS	b2086	0.63	+1.0
2,167,306	+	yegS	b2086	0.63	-0.6
2,167,324	+	yegS	b2086	0.65	+0.9
2,167,325	+	yegS	b2086	0.65	-0.8
2,167,325	+	yegS	b2086	0.65	+0.4
2,167,328	-	yegS	b2086	0.66	+2.4